Lipid of the Month

Each month we highlight a lipid of scientific interest. The LIPID MAPS® Lipid of the Month Archive lists lipids highlighted from 2015 - present.

March 2026

Lipid of the month alpha-mycolic acid

It’s nearly 18,000 years ago, Wyoming is in the grip of the last ice age and bison trudge over the snowy ground. Failing to see the edge, one animal, with a chronic respiratory condition, falls into Natural Trap Cave, a sinkhole in the ancient limestone. The 30m fall is likely instantly fatal.

Fast forward to modern times and the bison’s bones are excavated and analysed. DNA from Mycobacterium tuberculosis is discovered in them1 but so also are lipids characteristic of the bacterium2, for example alpha-mycolic acid. These findings show the bison was suffering from TB.

Alpha-mycolic acid forms a family of very long chain fatty acids, typically between 60 and 90 carbons long divided into 2 sidechains and with one or more cyclopropane groups. One of the most abundant found in the bison had 80 carbons. Alpha-mycolic acid is part of a complex array of lipids in the cell wall of M. tuberculosis which makes it resistant to dehydration, many drugs, and allows it to live inside macrophages. The bacterium was discovered by Robert Koch, who announced his finding that it caused TB on 24th March 18823, the reason world TB day occurs on that date.

In spite of many efforts, TB still kills over 1 million people each year. The surface lipids modulate interactions with the host, and so are promising targets for anti-TB drugs4.

References

  • Mycobacterium tuberculosis complex DNA from an extinct bison dated 17,000 years before the present
    Clin Infect Dis
    2001
    DOI 10.1086/321886
  • Mycobacterium tuberculosis complex lipid virulence factors preserved in the 17,000-year-old skeleton of an extinct bison, Bison antiquus
    PLoS One
    2012
    DOI 10.1371/journal.pone.0041923
  • Steps towards the discovery of Mycobacterium tuberculosis by Robert Koch, 1882
    Clin Microbiol Infect
    2014
    DOI 10.1111/1469-0691.12555
  • The lipid language of tuberculosis: Mycobacterium tuberculosis surface molecules in host interaction and drug resistance
    mBio
    2026
    DOI 10.1128/mbio.03959-25

Lipid of the Month Archive

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2020

December 2020

Lipid of the Month

In A Christmas Carol, Charles Dickens describes Marley’s ghost as having “a dismal light about it, like a bad lobster in a dark cellar.” Written before electric lighting and refrigeration, luminescent lobsters might have been a more commonly observed phenomenon than they are today.

The dismal light of Dickens’ decaying decapod would have been triggered by an acyl homoserine lactone (AHL), December’s lipid of the month.

Several species of bacteria, including Vibrio harveyi, an opportunistic pathogen of shellfish, produce light. Given it’s ecological niche, there would likely be lots of V. harveyi on the surface of a rotting lobster, and it’s only when there are lots in one place that they make light. AHL is used to sense how many bacteria are around using a system known as quorum sensing. Different species make different AHLs, each with specific acyl groups. In the case of V. harveyi, 3-hydroxybutyryl homoserine lactone is it’s calling-card1.

Each bacterium secretes AHL and is able to sense its concentration in the environment. If the bacterium is swimming about in the sea, the AHL quickly gets diluted and as the concentration is very low, no light is produced. As a single bacterium could not make enough light to be detected, doing so would be futile. However, if there are lots of bacteria in one place, the concentration of AHL is increased because they’re all secreting it, and it acts to switch on transcription of the genes needed to generate light. Many bacteria in one place make enough light for the blue-green glow to be visible.

While it may be hard to see the evolutionary advantage in making rotting lobsters glow, species related to V. harveyi form symbiotic relationships with squid and fish, and live in their light-emitting organs where producing light is critical for the symbiosis.

Quorum sensing, far from just prompting bacteria to make the ghostly glow Dickens spoke of, is also critical for other bacterial properties, including many which have practical implications for humans. For example, the pathogen Pseudomonas aeruginosa uses N-(3-oxododecanoyl)homoserine lactone to sense how many of its fellow bacteria are around, which contributes to its virulence2>.

References

  • Biosynthesis and stereochemistry of the autoinducer controlling luminescence in <em>Vibrio harveyi<em>
    J. Bacteriol.
    1993
    DOI 10.1128/jb.175.12.3856-3862.1993
  • The <em>Pseudomonas aeruginosa<em> Quorum-Sensing Molecule N-(3-Oxododecanoyl)Homoserine Lactone Contributes to Virulence and Induces Inflammation <em>In Vivo<em>
    J. Bacteriol.
    2002
    DOI 10.1128/jb.184.4.1132-1139.2002


November 2020

Lipid of the Month

Turn the clock back 50 years, and phospholipids were considered solely structural components of cell membranes. However, in the 1970s a compound which caused platelet aggregation, blood clotting, and promoted inflammation was identified. It was named platelet-activating factor (PAF); and in 1979 shown to be a phospholipid 1

PAF is a phospholipid in which the glycerol has an alkyl group, typically of 16 carbons (though this varies) attached via an ether linkage at the sn-1 position. The sn-2 position is occupied by an acetate group while sn-3 position carries the phosphocholine headgroup. It interacts with a specific G-coupled protein receptor to cause some, if not all, of its effects and is active at picomolar concentrations.

PAF can be synthesised in two ways, either the ‘remodelling pathway’ by which it is synthesised from membrane alkyl/acyl phospholipids via the enzyme phoshpolipase A2 which removes the acyl chain at the sn-2 position, forming a lyso-phosphocholine. The sn-2 position is then enzymatically esterified with an acetyl group to form PAF. The other route to its synthesis is the ‘de novo’ route in which the alkylglycerol part is first formed, then the phosophocholine head group is added. Finally the acetyl group is added via the same enzyme as in the remodelling pathway.

Not only is this lipid involved in inflammatory and allergic processes, but it has also been implicated in cancers, and neurodegenerative diseases such as Alzheimers’2. Platelet activating factor does much more than activate platelets and there is doubtless much still to be learnt about this molecule.

References

  • Platelet-activating factor. Evidence for 1-O-alkyl-2-acetyl-sn-glyceryl-3-phosphorylcholine as the active component (a new class of lipid chemical mediators)
    J. Biol. Chem
    1979
  • Forty Years Since the Structural Elucidation of Platelet-Activating Factor (PAF): Historical, Current, and Future Research Perspectives
    Molecules
    2019
    DOI 10.3390/molecules24234414


October 2020

Lipid of the Month

It’s October already and here in the northern hemisphere it is what the poet Keats described as ‘the season of mists and mellow fruitfulness’, which, he said, conspires with the sun to ‘swell the gourd’. October’s lipid of the month is found in, and named after, the gourd (Cucurbitaceae) family of plants, including Halloween and Thanksgiving’s iconic gourd, the pumpkin.

Cucurbitacin B is a particularly widespread cucurbitacin, present in many different plant species. Like other cucurbitacins it is a triterpenoid, a huge family of molecules formed from squalene which also encompasses cholesterol and the steroid hormones. Cucurbitacins often occur modified by sugars. Cucurbitacin B glucoside (LMST01010408), where a glucose is linked at the 2-position (the hydroxyl group towards the bottom left of the image) is also called arvenin I as it was first discovered in Anagallis arvensis- not a gourd but a primrose1.

Many cucurbitacins have a bitter taste, indeed arvenin I is described as ‘strongly bitter’, and are likely produced as a defense to try and prevent the plant (and the pumpkin) being eaten. Ironically, some of these taste properties appeal to humans, so the very things designed to protect, actually encourage us to eat them. Of course this is still beneficial for the plant, as human cultivation ensures success for a species.

Various pharmacological properties have been ascribed to Cucurbitacin B, including anti-inflammatory and anti-cancer properties against several different tumour types, such as those in the liver 2. It has even been reported to protect memory in a mouse-model of Alzheimers’ disease3.

So while LIPID MAPS is in no way giving you medical advice, remember if you’re making a pumpkin pie, carving a pumpkin lantern, or maybe both, there’s more to a pumpkin than a wholesome meal and seasonal fun.

References

  • Isolation and structures of arvenins from Anagallis arvensis L. (Primulaceae). New cucurbitacin glucosides
    Chem Pharm Bull (Tokyo)
    1978
    DOI 10.1248/cpb.26.3107
  • Cucurbitacin B induces apoptosis and S phase cell cycle arrest in BEL-7402 human hepatocellular carcinoma cells and is effective via oral administration
    Cancer Letters
    2010
    DOI 10.1016/j.canlet.2010.01.029
  • Cucurbitacin B induces neurogenesis in PC12 cells and protects memory in APP/PS1 mice
    Cell Mol Med
    2019
    DOI 10.1111/jcmm.14514


September 2020

Lipid of the Month

Absentmindedly crush a leaf while out on a country walk and you are likely to set up a whole cascade of reactions within the plant. One of them results in the formation of Arabidopside A1, a member of the arabidopside family of plant oxylipins discovered in the model plant, Arabidopsis thaliana.

The major lipids in plant membranes, particularly membranes of the chloroplast, are galactolipids, a glycerol esterified by two acyl chains and with a galactose sugar as the polar group. The arabidopsides are galactolipids produced in response to plant wounding or infection2. They are characterised by the presence of oxophytodienoic acid and/or dinor-oxophytodienoic acid as the acyl chains. Arabidopside A contains both of these species, the former at the sn1 position, and the latter at sn2. Phytodienoic acids are known plant hormones in their own right and precursors of the well known plant hormone jasmonic acid. They are chemically similar to the mammalian inflammatory signalling molecules, the prostaglandins.

Exactly how the arabidopsides function isn’t really known, it’s been suggested that they are reservoirs of phytodienoic acids which can be released when needed, but that doesn’t explain why their concentration increases when a plant is wounded. Just imagine how much arabidopside you might cause a plant to make when you mow the lawn!

References

  • Arabidopsides A and B, two new oxylipins from Arabidopsis thaliana
    Tetrahedron Letters
    1993
    DOI 10.1016/S0040-4039(03)01148-1
  • Wounding Stimulates the Accumulation of Glycerolipids Containing Oxophytodienoic Acid and Dinor-Oxophytodienoic Acid in Arabidopsis Leaves
    Plant Physiology
    2006
    DOI 10.1104/pp.106.082115


August 2020

Lipid of the Month

Coprostanol, August’s lipid of the month, is used as a biomarker indicating the presence of sewage in the environment. It is formed by gut bacteria which reduce dietary cholesterol to produce coprostanol, a highly water-insoluble molecule which, in anaerobic conditions, can be stable for thousands of years. This means that coprostanol is not only useful to monitor modern cases of sewage contamination, but can also be used as an indicator of the presence of sewage in archaeological sites. Its very poor water solubility means that any coprostanol in a sample is likely to have originated within the sample, rather than have been deposited from contaminated water flowing through the area over time.

Just as cholesterol is reduced to coprostanol, other dietary sterols are reduced to their respective stanols by gut bacteria. The plant-based diet of ruminant animals results in more faecal stigmastanol, produced from sitosterol. Stanol biomarker ratios therefore can be diagnostic of the species of the faeces[1].

A recent study in Science Advances[2] analysed stanol biomarkers in 12400 year old coprolites (fossilised excreta) found in an Oregon cave. DNA evidence had previously suggested these were human in origin, but a question of contamination with modern DNA remained. Because coprostanol is not able to seep over time into a sample through contaminated water, and contamination during analysis is extremely unlikely (unless you’re doing science really badly!), the ratio of coprostanol to other sterols in the sample confirmed them to be “unequivocally” human in origin. This research adds to the body of knowledge and the debate surrounding the first human settlement of the Americas.

References

  • The origin of faeces by means of biomarker detection
    Environment International
    2002
    DOI 10.1016/s0160-4120(01)00124-6
  • Pre-Clovis occupation of the Americas identified by human fecal biomarkers in coprolites from Paisley Caves, Oregon
    Science Advances
    2020
    DOI 10.1126/sciadv.aba6404


July 2020

Lipid of the Month

July’s lipid of the month, chaulmoogric acid, is an ingredient in the first effective leprosy treatment. Found in the seeds of the chaulmoogra tree (Hydnocarpus wightianus), it’s an unusual fatty acid containing a cyclopentenyl group which is thought to act as a biotin mimic, though its mode of action isn’t really known.

Chaulmoogra oil had been used for centuries as an ointment to treat leprosy, but the viscous, insoluble and noxious substance was unsuitable for internal treatment. Alice Ball, a pharmaceutical chemist at the University of Hawaii solved that by developing a method of solubilising the (presumed) active ingredients of chaulmoogra oil, chaulmoogric acid and the related hydnocarpic acid, in useful quantities. Ball’s method was essentially saponification to release the fatty acids from triglycerides and then esterification.

Born in July 1892, Ball died aged only 24, before her method could be published and before she could know how effective it was. The work was continued, with no reference to Ball, by Arthur Dean, the preparation of Chaulmoogra oil becoming known as ‘Dean derivatives’. A review by Harry T Hollmann in 1922[1] attempted to set the record straight. Hollmann, a doctor at Kalhihi hospital in Hawaii where leprosy patients were sent, had invited Ball to look into producing a soluble chaulmoogra oil derivative. In the review he explains how Ball, the first woman, and first African American to receive a Masters degree from the College of Hawaii, developed the process of producing ethyl esters of chaulmoogra oil. Under the name ‘Dean derivatives’, these were credited with curing 78 patients at the Kalhihi hospital, who were discharged “no longer a menace to society”[2]. Alice Ball’s preparation remained the treatment for leprosy until the advent of antibiotics in the 1940s.

You can read more about Alice Ball in Brianna Bibel’s excellent blog, ‘The Bumbling Biochemist’

References



June 2020

Lipid of the Month

Fatty acid esters of hydroxyl fatty acids (FAHFAs, or estolides) are a fairly recent addition to the known mammalian lipidome. They were described in 2016 as a class of lipids with both anti-diabetic and anti-inflammatory effects [1]. Given the combinatorial possibilities of linking a fatty acid with a further hydroxylated fatty acid, where the hydroxyl could be anywhere along the chain, the FAHFA family has potential to be vast.

One example, the linoleic acid ester of 13-hydroxylinoleic acid (13-LAHLA)[2] has been shown to have anti-inflammatory effects. It suppresses expression of genes involved in inflammation such as interleukins 6 and 1beta. It also suppresses expression of cyclooxygenase 2, an enzyme in the prostaglandin synthesis pathway and the target of the commonly used drug ibuprofen.

While it is known that some FAHFAs are ligands for G-protein coupled receptors, their precise mechanism of action, and indeed the full extent of the family, remains to be worked out. There is still much work to be done.

References

  • Discovery of a class of endogenous mammalian lipids with anti-diabetic and anti-inflammatory effects
    Cell
    October 2014
    DOI 10.1016/j.cell.2014.09.035
  • Linoleic acid esters of hydroxy linoleic acids are anti-inflammatory lipids found in plants and mammals
    J.Biol.Chem
    May 2019
    DOI 10.1074/jbc.RA118.006956


May 2020

Lipid of the Month

Sterol lipids function as hormones across a wide range of species and can have a dramatic effect on the morphology of an individual. 20-Hydroxyecdysone is one such sterol hormone which controls skin-shedding and body pattern in arthropods such as crabs and insects. Its effects on an individual can be dramatic.

A recent paper [1] from Antonia Monteiro’s lab showed 20-Hydroxyecdysone to have a pivotal role in controlling the size of ‘eye spots’ on the wings of the African butterfly Bicyclus anynana. Adults which emerge from their pupae in the wet season have large eyespots on their wings but those which reach adulthood in the dry season, lack eye spots and are a more dull brown colour.

This difference is determined by the temperature experienced by the caterpillar over two specific days of its life, just before it pupates. While many species show a difference in levels of 20-Hydroxyecdysone depending on temperature, Monteiro showed that in B. anynana, cells in the centre of what would become the eyespot contained the 20-Hydroxyecdysone receptor, making them very sensitive to the hormone.

20-Hydroxyecdysone is not just made by arthropods. Some plants also produce this hormone, presumably as a defence mechanism, disrupting the development of insects grazing on them.

References

  • Origin of the mechanism of phenotypic plasticity in satyrid butterfly eyespots
    eLife
    February 2020
    DOI 10.7554/eLife.49544


April 2020

Lipid of the Month

Humans are unable to synthesise linoleic acid, and so we must obtain it through the food we eat. Linoleic acid was discovered to be essential in the diet by Mildred and George Burr, working at the University of Minnesota in 1930[1]. They showed that fats were not simply of calorific value but some, including linoleic acid, were absolutely required for health.

Linoleic acid is an 18-carbon fatty acid with two double bonds and present in large amounts in many vegetable oils. It’s one of those polyunsaturated fats which the adverts tell us are good for us.

It’s a precursor to arachidonic acid, which in turn is a precursor to a great many lipidic signalling molecules in the body. A study published in January 2019 looked at the effect of coronavirus infection on cellular lipids and showed that linoleic to arachidonic acid metabolism was “the most perturbed pathway” on infection of cells in their model system.[2]

References

  • On the nature and role of the fatty acids essential in nutrition
    J. Biol. Chem.
    January 1930
  • Characterization of the Lipidomic Profile of Human Coronavirus-Infected Cells: Implications for Lipid Metabolism Remodeling upon Coronavirus Replication.
    Viruses
    2019, 11(1), 73
    DOI 10.3390/v11010073


March 2020

Lipid of the Month

Ergosta-5,7,22E-trien-3β-ol (Ergosterol) is a sterol found in cell membranes of fungi and protozoa, but not animals. The common name, "ergosterol", of this lipid is derived from the group of fungi from which it was first isolated — "ergot" fungi, of genus Claviceps.

The role of ergosterol in fungi is similar to that of cholesterol in animal cells and ergosterol is essential to their survival. Ergosterol is synthesized from lanosterol and several anti-fungal drugs work by targeting erogsterol — either by binding to it, resulting in devastating cellular leakage, or preventing the synthesis of ergosterol from lanosterol.

References






February 2020

Lipid of the Month

9-oxo-11R,15S-dihydroxy-5Z,13E-prostadienoic acid(PGE2) is an oxytocic prostaglandin. PGE2's synthetic equivalent, the drug "dinoprostone", is commonly administered during childbirth — to induce labor by stimulating uterine contraction; to promote cervical ripening; and to control postpartum hemorrhage (PPH). PGE2 has also been shown to be involved in stem cell development via modulation of the Wnt pathway.

References

  • Nobiletin: efficient and large quantity isolation fromorange peel extract
    Biomed. Chromatogr
    20: 133 –138 (2006)
    DOI 10.1002/bmc.540
  • Nobiletin restoring beta-amyloid-impaired CREB phosphorylation rescues memory deterioration in Alzheimer's disease model rats.
    Neurosci Lett.
    2006 Jun 12,400(3):230-4. Epub 2006 Apr 3.
    DOI 10.1016/j.neulet.2006.02.077
  • Nobiletin and Derivatives: Functional Compounds from Citrus Fruit Peel for Colon Cancer Chemoprevention
    Cancers
    2019, 11(6), 867
    DOI 10.3390/cancers11060867
  • The citrus flavonoid nobiletin confers protection from metabolic dysregulation in high-fat-fed mice independent of AMPK
    J. Lipid Res.
    First Published on January 21, 2020
    DOI 10.1194/jlr.RA119000542


January 2020

Lipid of the Month

4Z,7Z,10Z,13Z,16Z,19Z-docosahexaenoic acid (DHA) - Fatty Acids and Conjugates [FA01]-> Unsaturated fatty acids [FA0306] - is a long-chain omega-3 polyunsaturated fatty acid [PUFA] commonly found in brain and retina[1,2]. DHA is thought to play a critical role in brain developent, to be involved in multiple aspects of cardiovascular function[3], and is implicated in multiple diseases and developmental disorders when deficient[1,3].

While DHA levels can be measured using isotope tracers, recent research demonstrates that it can be measured by natural abundance carbon isotope ratio analysis, which is less costly and generally safer[4].

References

  • Essential Fatty Acids: the Importance of n-3 Fatty Acids in the Retina and Brain
    Nutrition Reviews
    Volume 50, Issue 4, April 1992, Pages 21–29
    DOI 10.1111/j.1753-4887.1992.tb01286.x
  • Essential role of docosahexaenoic acid towards development of a smarter brain
    Neurochem Int
    2015 Oct;89:51-62. Epub 2015 Aug 28
    DOI 10.1016/j.neuint.2015.08.014
  • Omega-3 fatty acids EPA and DHA: health benefits throughout life
    Adv Nutr
    2012 Jan;3(1):1-7. Epub 2012 Jan 5
    DOI 10.3945/an.111.000893
  • Turnover of brain DHA in mice is accurately determined by tracer-free natural abundance carbon isotope ratio analysis
    Journal of Lipid Research
    January 2020, 61, 116-126
    DOI 10.1194/jlr.D119000518


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