Structure Database (LMSD)

Common Name
GalAalphaCer(d20:1(13Z)/14:0(2OH[S]))
Systematic Name
N-(2S-hydroxytetradecanoyl)-1-α-galacturonosyl-13Z-eicosasphingenine
Synonyms
LM ID
LMSP06000008
Formula
Exact Mass
Calculate m/z
729.5391
Status
Curated

Classification

References

Comments
Submitted by B Spenceley & D Campopiano

Taxonomy Information

Curated from
NCBI taxonomy class
Reference
Sphingobium yanoikuyae (#13690)
Alphaproteobacteria (#28211)
Confirmation of the anomeric structure of galacturonic acid in the galacturonosyl-ceramide of Sphingomonas yanoikuyae.,
Microbiol Immunol, 2006
Pubmed ID: 16428876

String Representations

InChiKey (Click to copy)
NHXIBOKUMLTPLW-UIGGKBRUSA-N
InChi (Click to copy)
InChI=1S/C40H75NO10/c1-3-5-7-9-11-13-15-16-17-18-19-21-22-24-26-28-32(42)31(30-50-40-36(46)34(44)35(45)37(51-40)39(48)49)41-38(47)33(43)29-27-25-23-20-14-12-10-8-6-4-2/h13,15,31-37,40,42-46H,3-12,14,16-30H2,1-2H3,(H,41,47)(H,48,49)/b15-13-/t31-,32+,33-,34-,35+,36+,37-,40-/m0/s1
SMILES (Click to copy)
[C@](CO[C@@H]1[C@H](O)[C@@H](O)[C@@H](O)[C@@H](C(=O)O)O1)([H])(NC([C@@H](O)CCCCCCCCCCCC)=O)[C@]([H])(O)CCCCCCCCC/C=C\CCCCCC

Other Databases

PubChem CID

Calculated Physicochemical Properties

Heavy Atoms 51
Rings 1
Aromatic Rings
Rotatable Bonds 33
Van der Waals Molecular Volume 779.18
Topological Polar Surface Area 188.08
Hydrogen Bond Donors 7
Hydrogen Bond Acceptors 11
logP 9.03
Molar Refractivity 204.71

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Created at
31st Mar 2026
Updated at
31st Mar 2026