Gene/Proteome Database (LMPD)

LMPD ID
LMP012134
Gene ID
567943
Species
Danio rerio (Zebrafish)
Gene Name
RAR-related orphan receptor B
Gene Symbol
rorb
Synonyms
rzrb; nr1f2; sb:eu943
Chromosome
5

Proteins

nuclear receptor ROR-beta
Refseq ID NP_001076325
Protein GI 130490232
UniProt ID A3R3J9
mRNA ID NM_001082856
Length 466
RefSeq Status PROVISIONAL
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQTGEAEALARVYSSSLTNGLSTLNHEIGGTYANGHVIDMPKGQANGAPGGYYGMDSTQASPDQSGLDITGMKQIKQEPIYDLTPVPNLFTYGSYQDSQLAPGVSMGELDRIAQNIIKSHLETCQYTAEELQQLAWQTHSYEEVKMYQSKTRDVLWQQCAIQVTHAIQYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQIFKTLGCDDLVSAVFDFAKSLCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNHLDEDALAKLISRIPTLSALCTLHTEELQAFQQLHPETVNMLFPPLYKELFNPDAAAVMPK

Gene Information

Entrez Gene ID
567943
Gene Name
RAR-related orphan receptor B
Gene Symbol
rorb
Species
Danio rerio

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0004879 IEA:InterPro F ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003707 IEA:InterPro F steroid hormone receptor activity
GO:0008270 IEA:InterPro F zinc ion binding

Domain Information

InterPro Annotations

Accession Description
IPR008946 Nuclear hormone receptor, ligand-binding
IPR000536 Nuclear hormone receptor, ligand-binding, core
IPR003079 ROR_rcpt
IPR001723 Steroid hormone receptor
IPR013088 Zinc finger, NHR/GATA-type
IPR001628 Zinc finger, nuclear hormone receptor-type

UniProt Annotations

Entry Information

Gene Name
RAR-related orphan receptor B
Protein Entry
A3R3J9_DANRE
UniProt ID
A3R3J9
Species
Zebrafish

Comments

Comment Type Description
Similarity Belongs to the nuclear hormone receptor family.
Similarity Contains nuclear receptor DNA-binding domain.

Identical and Related Proteins

Unique RefSeq proteins for LMP012134 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
130490232 RefSeq NP_001076325 466 nuclear receptor ROR-beta

Identical Sequences to LMP012134 proteins

Reference Database Accession Length Protein Name
GI:130490232 GenBank ABO15413.1 466 retinoid-related orphan receptor b [Danio rerio]

Related Sequences to LMP012134 proteins

Reference Database Accession Length Protein Name
GI:130490232 RefSeq XP_005473205.1 472 PREDICTED: nuclear receptor ROR-beta isoform X2 [Oreochromis niloticus]
GI:130490232 RefSeq XP_005809034.1 472 PREDICTED: nuclear receptor ROR-beta-like [Xiphophorus maculatus]
GI:130490232 RefSeq XP_007564522.1 472 PREDICTED: nuclear receptor ROR-beta isoform X2 [Poecilia formosa]
GI:130490232 RefSeq XP_008293929.1 472 PREDICTED: nuclear receptor ROR-beta isoform X1 [Stegastes partitus]
GI:130490232 RefSeq XP_008293930.1 472 PREDICTED: nuclear receptor ROR-beta isoform X2 [Stegastes partitus]
GI:130490232 RefSeq XP_008417357.1 472 PREDICTED: nuclear receptor ROR-beta isoform X2 [Poecilia reticulata]