Gene/Proteome Database (LMPD)

LMPD ID
LMP012015
Gene ID
555578
Species
Danio rerio (Zebrafish)
Gene Name
retinoid X receptor, alpha a
Gene Symbol
rxraa
Synonyms
RXRalpha-B
Chromosome
21

Proteins

retinoic acid receptor RXR-alpha-A
Refseq ID NP_001155023
Protein GI 238859643
UniProt ID F1Q4V9
mRNA ID NM_001161551
Length 458
RefSeq Status PROVISIONAL
MLLSAFLPTDCTGQVTSSPLSSPTSHRGMHPSLLSPTSLGPSGSLHSPISTLSSPMNGLGSPFSVISSPMGPHSMASPGVGYGPSISPQLNSPMNSVSSSEDIKPPLGLNGVMKVPAQPSGTPLSLTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCVIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRAKERSENEVESTSSANEDMPVEKILEAELAVEPKTETYIETNVPMPSNSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPGEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT

Gene Information

Entrez Gene ID
555578
Gene Name
retinoid X receptor, alpha a
Gene Symbol
rxraa
Species
Danio rerio

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003700 IEA:InterPro F sequence-specific DNA binding transcription factor activity
GO:0003707 IEA:InterPro F steroid hormone receptor activity
GO:0008270 IEA:InterPro F zinc ion binding
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR008946 Nuclear hormone receptor, ligand-binding
IPR000536 Nuclear hormone receptor, ligand-binding, core
IPR021780 Nuclear/hormone receptor activator site AF-1
IPR000003 Retinoid X receptor/HNF4
IPR001723 Steroid hormone receptor
IPR013088 Zinc finger, NHR/GATA-type
IPR001628 Zinc finger, nuclear hormone receptor-type

UniProt Annotations

Entry Information

Gene Name
retinoid X receptor, alpha a
Protein Entry
F1Q4V9_DANRE
UniProt ID
F1Q4V9
Species
Zebrafish

Comments

Comment Type Description
Caution The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.
Similarity Belongs to the nuclear hormone receptor family.
Similarity Contains nuclear receptor DNA-binding domain.

Identical and Related Proteins

Unique RefSeq proteins for LMP012015 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
238859643 RefSeq NP_001155023 458 retinoic acid receptor RXR-alpha-A

Identical Sequences to LMP012015 proteins

Reference Database Accession Length Protein Name

Related Sequences to LMP012015 proteins

Reference Database Accession Length Protein Name
GI:238859643 RefSeq XP_005161240.1 500 PREDICTED: retinoic acid receptor RXR-alpha-A isoform X1 [Danio rerio]
GI:238859643 RefSeq XP_005161241.1 495 PREDICTED: retinoic acid receptor RXR-alpha-A isoform X2 [Danio rerio]
GI:238859643 RefSeq XP_005725693.1 475 PREDICTED: retinoic acid receptor RXR-alpha-A-like [Pundamilia nyererei]
GI:238859643 RefSeq XP_005948128.1 533 PREDICTED: retinoic acid receptor RXR-alpha-A-like [Haplochromis burtoni]
GI:238859643 RefSeq XP_007561688.1 496 PREDICTED: retinoic acid receptor RXR-alpha-A isoform X2 [Poecilia formosa]
GI:238859643 RefSeq XP_008303103.1 496 PREDICTED: retinoic acid receptor RXR-alpha isoform X4 [Stegastes partitus]