Gene/Proteome Database (LMPD)

LMPD ID
LMP011735
Gene ID
405759
Species
Danio rerio (Zebrafish)
Gene Name
nuclear receptor subfamily 5, group A, member 1b
Gene Symbol
nr5a1b
Synonyms
ff1d; nr5a2l; SI:zC167P9.2
Chromosome
21

Proteins

steroidogenic factor 1
Refseq ID NP_997999
Protein GI 47086369
UniProt ID Q800U8
mRNA ID NM_212834
Length 502
RefSeq Status PROVISIONAL
MDYSYDADLEEMCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNNKRYTCAESQDCKIDKTQRKRCPFCRFQKCLNVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQKKALIRASGLKMEATPPLLTSPQPDYTFSTALSVPAPKNTHPNIVTSVAPTDYERSLYASSSLSLSVPIPAHTPLPAQYPYPNLPSRAIKSEYPDHYTSSEHYTSASSPESVPGYTYIEQTRVSSSPQVVAPGLTVPPLVLEFVRCEQDELQVQSKISAHLAHLQQEQNSRSTAANQEQSSRLAAKPERLSTFGLMCHMADQTLFSIVEWARSCIFFKELKVGDQMKLLHNCWSELLVLDYVARQLHHGKEDSVLLITGQEVELASLLAQAGVTLSGMIQRGQELVQRLQELQLDRRETACLKYLILFNPDVKLLENQPYVESVYEQVNAALLEYTLCAYPQFPDRFSQILLRLPELRALSSQAEDYLCYKHLSGEVPCNNLLIEMLHAKRTCI

Gene Information

Entrez Gene ID
405759
Gene Name
nuclear receptor subfamily 5, group A, member 1b
Gene Symbol
nr5a1b
Species
Danio rerio

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0003677 NAS:ZFIN F DNA binding
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003700 IEA:InterPro F sequence-specific DNA binding transcription factor activity
GO:0003707 IEA:InterPro F steroid hormone receptor activity
GO:0008270 IEA:InterPro F zinc ion binding
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR008946 Nuclear hormone receptor, ligand-binding
IPR000536 Nuclear hormone receptor, ligand-binding, core
IPR001723 Steroid hormone receptor
IPR016355 Steroidogenic_factor_1
IPR013088 Zinc finger, NHR/GATA-type
IPR001628 Zinc finger, nuclear hormone receptor-type

UniProt Annotations

Entry Information

Gene Name
nuclear receptor subfamily 5, group A, member 1b
Protein Entry
Q800U8_DANRE
UniProt ID
Q800U8
Species
Zebrafish

Comments

Comment Type Description
Similarity Belongs to the nuclear hormone receptor family.
Similarity Contains nuclear receptor DNA-binding domain.

Identical and Related Proteins

Unique RefSeq proteins for LMP011735 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
47086369 RefSeq NP_997999 502 steroidogenic factor 1

Identical Sequences to LMP011735 proteins

Reference Database Accession Length Protein Name
GI:47086369 EMBL CAE30391.1 502 novel protein similar to Carassius auratus nuclear hormone receptor FTZ-F1 [Danio rerio]
GI:47086369 GenBank AAO59489.1 502 Ff1d [Danio rerio]
GI:47086369 GenBank AAI62260.1 502 Nuclear receptor subfamily 5, group A, member 1b [Danio rerio]
GI:47086369 GenBank AAI62252.1 502 Nuclear receptor subfamily 5, group A, member 1b [Danio rerio]

Related Sequences to LMP011735 proteins

Reference Database Accession Length Protein Name
GI:47086369 GenBank AAM89250.1 503 FTZ-F1 [Carassius auratus]
GI:47086369 GenBank ABV71399.1 503 SF-1 [Cyprinus carpio]
GI:47086369 GenBank AGJ70386.1 502 nuclear receptor subfamily 5 group A member 1b [Gobiocypris rarus]
GI:47086369 GenBank AGZ80869.1 503 nuclear receptor subfamily 5 group A member 1b variant 1 [Carassius auratus ssp. 'Pengze']
GI:47086369 GenBank AGZ80870.1 503 nuclear receptor subfamily 5 group A member 1b variant 2 [Carassius auratus ssp. 'Pengze']
GI:47086369 GenBank AGZ80871.1 498 nuclear receptor subfamily 5 group A member 1b variant 3 [Carassius auratus ssp. 'Pengze']