Gene/Proteome Database (LMPD)

LMPD ID
LMP011675
Gene ID
393564
Species
Danio rerio (Zebrafish)
Gene Name
nuclear receptor subfamily 2, group F, member 1b
Gene Symbol
nr2f1b
Synonyms
nr2f1l; zgc:65854; zgc:77353
Chromosome
10

Proteins

nuclear receptor subfamily 2 group F member 1-B
Refseq ID NP_956886
Protein GI 55925486
UniProt ID Q6PH18
mRNA ID NM_200592
Length 389
RefSeq Status PROVISIONAL
MAMVVSAWRDPQEELAAVDDQSAAGREHLQHRHSPKSAEEKAQIAAQNQQHVECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRNCPVDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMPPNQPNPSHYALTNGDHLNGQCYLSGYISLLLRAEPYPASRYGNQCMQSGNIMGIENICELAARLLFSAVEWARNIPFFPDLQITDQVSLLRLTWSELFVLNAAQSSMPLHVAPLLAAAGLHASPMSADRVVAFMDHIRFFQEQVEKLKALQVDSAEYSCAKAIVLFTSDACGLSDIPHIEGLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPALRMVSSSVIEQLFFVRLVGKTPIETLIRDMLLSGSSFNWPYMPIQ

Gene Information

Entrez Gene ID
393564
Gene Name
nuclear receptor subfamily 2, group F, member 1b
Gene Symbol
nr2f1b
Species
Danio rerio

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0004879 IEA:InterPro F ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003707 IEA:InterPro F steroid hormone receptor activity
GO:0008270 IEA:InterPro F zinc ion binding

Domain Information

InterPro Annotations

Accession Description
IPR008946 Nuclear hormone receptor, ligand-binding
IPR000536 Nuclear hormone receptor, ligand-binding, core
IPR001723 Steroid hormone receptor
IPR003068 Transcription factor COUP
IPR013088 Zinc finger, NHR/GATA-type
IPR001628 Zinc finger, nuclear hormone receptor-type

UniProt Annotations

Entry Information

Gene Name
nuclear receptor subfamily 2, group F, member 1b
Protein Entry
Q6PH18_DANRE
UniProt ID
Q6PH18
Species
Zebrafish

Comments

Comment Type Description
Alternative Products Event=Alternative splicing; Named isoforms=2; Name=1; IsoId=Q6PH18-1; Sequence=Displayed; Note=No experimental confirmation available. ; Name=2; IsoId=Q6PH18-2; Sequence=VSP_053051; Note=No experimental confirmation available. ;
Function Putative transcription factor that is required in photoreceptor cells precursors during eye development.
Similarity Belongs to the nuclear hormone receptor family. NR2 subfamily.
Similarity Contains 1 nuclear receptor DNA-binding domain.
Subcellular Location Nucleus {ECO:0000255|PROSITE- ProRule:PRU00407}.
Tissue Specificity Expressed the retina, where expression is restricted to the outer nuclear layer.

Identical and Related Proteins

Unique RefSeq proteins for LMP011675 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
55925486 RefSeq NP_956886 389 nuclear receptor subfamily 2 group F member 1-B

Identical Sequences to LMP011675 proteins

Reference Database Accession Length Protein Name
GI:55925486 GenBank AAH56748.1 389 Nuclear receptor subfamily 2, group F, member 1b [Danio rerio]
GI:55925486 SwissProt Q6PH18.1 389 RecName: Full=Nuclear receptor subfamily 2 group F member 1-B; AltName: Full=COUP transcription factor 1-B; Short=COUP-TFalpha-B [Danio rerio]

Related Sequences to LMP011675 proteins

Reference Database Accession Length Protein Name
GI:55925486 GenBank AAH65651.1 388 Nr2f1b protein [Danio rerio]
GI:55925486 GenBank AHH42553.1 411 Nuclear receptor subfamily 2 group F member 1-A [Ictalurus punctatus]
GI:55925486 RefSeq XP_004949460.1 390 PREDICTED: nuclear receptor subfamily 2 group F member 1-A isoform X3 [Gallus gallus]
GI:55925486 RefSeq XP_005155493.1 388 PREDICTED: nuclear receptor subfamily 2 group F member 1-B isoform X1 [Danio rerio]
GI:55925486 RefSeq XP_006626565.1 413 PREDICTED: nuclear receptor subfamily 2 group F member 1-A-like [Lepisosteus oculatus]
GI:55925486 RefSeq XP_007531721.1 388 PREDICTED: COUP transcription factor 1 isoform X3 [Erinaceus europaeus]