Gene/Proteome Database (LMPD)

LMPD ID
LMP011479
Gene ID
30530
Species
Danio rerio (Zebrafish)
Gene Name
retinoid x receptor, beta a
Gene Symbol
rxrba
Synonyms
RXR; RXRA; rxrb; rxre; NR2B2-A; wu:fb93c09; etID309733.19
Chromosome
19

Proteins

retinoic acid receptor RXR-beta-A
Refseq ID NP_571350
Protein GI 24308520
UniProt ID Q7SYN5
mRNA ID NM_131275
Length 438
RefSeq Status PROVISIONAL
MTSLPPITSAVNSPISSMGSPFSVISSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHAVSSSDDVKPPFGLKPLSSHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKERDGEVESSSAANEEMPVEKILEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDDQVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEAYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT

Gene Information

Entrez Gene ID
30530
Gene Name
retinoid x receptor, beta a
Gene Symbol
rxrba
Species
Danio rerio

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003700 IEA:InterPro F sequence-specific DNA binding transcription factor activity
GO:0003707 IEA:InterPro F steroid hormone receptor activity
GO:0008270 IEA:InterPro F zinc ion binding
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR008946 Nuclear hormone receptor, ligand-binding
IPR000536 Nuclear hormone receptor, ligand-binding, core
IPR021780 Nuclear/hormone receptor activator site AF-1
IPR000003 Retinoid X receptor/HNF4
IPR001723 Steroid hormone receptor
IPR013088 Zinc finger, NHR/GATA-type
IPR001628 Zinc finger, nuclear hormone receptor-type

UniProt Annotations

Entry Information

Gene Name
retinoid x receptor, beta a
Protein Entry
Q7SYN5_DANRE
UniProt ID
Q7SYN5
Species
Zebrafish

Comments

Comment Type Description
Similarity Belongs to the nuclear hormone receptor family.
Similarity Contains nuclear receptor DNA-binding domain.

Identical and Related Proteins

Unique RefSeq proteins for LMP011479 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
24308520 RefSeq NP_571350 438 retinoic acid receptor RXR-beta-A

Identical Sequences to LMP011479 proteins

Reference Database Accession Length Protein Name
GI:24308520 EMBL CAK11471.1 438 retinoid x receptor, beta [Danio rerio]
GI:24308520 GenBank AAC59722.1 438 retinoid X receptor epsilon [Danio rerio]
GI:24308520 PRF - 438 retinoid X receptor:ISOTYPE=epsilon [Danio rerio]
GI:24308520 RefSeq XP_009292301.1 438 PREDICTED: retinoic acid receptor RXR-beta-A isoform X1 [Danio rerio]

Related Sequences to LMP011479 proteins

Reference Database Accession Length Protein Name
GI:24308520 EMBL CAK11469.1 487 retinoid x receptor, beta [Danio rerio]
GI:24308520 GenBank AAH54649.1 471 Rxrba protein [Danio rerio]
GI:24308520 RefSeq XP_005159467.1 471 PREDICTED: retinoic acid receptor RXR-beta-A isoform X4 [Danio rerio]
GI:24308520 RefSeq XP_005159468.1 463 PREDICTED: retinoic acid receptor RXR-beta-A isoform X6 [Danio rerio]
GI:24308520 RefSeq XP_009292297.1 480 PREDICTED: retinoic acid receptor RXR-beta-A isoform X2 [Danio rerio]
GI:24308520 SwissProt Q7SYN5.1 471 RecName: Full=Retinoic acid receptor RXR-beta-A; AltName: Full=Nuclear receptor subfamily 2 group B member 2-A; AltName: Full=Retinoid X receptor beta-A [Danio rerio]