Gene/Proteome Database (LMPD)

LMPD ID
LMP011048
Gene ID
844192
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
sodium Bile acid symporter family
Gene Symbol
AT1G78560
Synonyms
T30F21.11; T30F21_11
Alternate Names
sodium Bile acid symporter family
Chromosome
1

Proteins

sodium Bile acid symporter family
Refseq ID NP_565182
Protein GI 18412023
UniProt ID Q93YR2
mRNA ID NM_106503
Length 401
RefSeq Status REVIEWED
MASAISLSLLNGATPLKSNSLHKSRLTPLHLRTISCSRLSYSPSSREISLKTQSTVPISCRRSRFDFVPRCGISSNDLPTEKKKSFGEWVEFVGEAVSTAFPIWVSLGCLLGLMRPSTFNWVTPNWTIVGLTITMLGMGMTLTLDDLRGALSMPKELFAGFLLQYSVMPLSAFFVSKLLNLPPHYAAGLILVGCCPGGTASNIVTYIARGNVALSVLMTAASTVSAVIMTPLLTAKLAKQYITVDALGLLMSTLQVVLLPVLAGAFLNQYFKKLVKFVSPVMPPIAVGTVAILCGYAIGQNASAILMSGKQVVLASCLLHISGFLFGYLFSRILGIDVASSRTISIEVGMQNSVLGVVLATQHFGNPLTAVPCAVSSVCHSILGSVLAGIWRRSAPKQLED

Gene Information

Entrez Gene ID
844192
Gene Name
sodium Bile acid symporter family
Gene Symbol
AT1G78560
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0009507 IDA:TAIR C chloroplast
GO:0009941 IDA:UniProtKB C chloroplast envelope
GO:0016021 IEA:UniProtKB-KW C integral component of membrane
GO:0008508 IEA:InterPro F bile acid:sodium symporter activity

REACTOME Pathway Links

REACTOME Pathway ID Description
6253667 SLC-mediated transmembrane transport
6253668 Transmembrane transport of small molecules
6254194 Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds

Domain Information

InterPro Annotations

Accession Description
IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3

UniProt Annotations

Entry Information

Gene Name
sodium Bile acid symporter family
Protein Entry
BASS1_ARATH
UniProt ID
Q93YR2
Species
Arabidopsis

Comments

Comment Type Description
Function May function as sodium-coupled metabolite transporter across the chloroplast envelope. {ECO:0000250}.
Sequence Caution Sequence=AAD30581.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
Similarity Belongs to the bile acid:sodium symporter (BASS) (TC 2.A.28) family. {ECO:0000305}.
Subcellular Location Membrane {ECO:0000305|PubMed:19542295}; Multi-pass membrane protein {ECO:0000305|PubMed:19542295}. Plastid, chloroplast envelope {ECO:0000305|PubMed:19542295}.

Identical and Related Proteins

Unique RefSeq proteins for LMP011048 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
18412023 RefSeq NP_565182 401 sodium Bile acid symporter family

Identical Sequences to LMP011048 proteins

Reference Database Accession Length Protein Name
GI:18412023 GenBank AAL24290.1 401 Unknown protein [Arabidopsis thaliana]
GI:18412023 GenBank AAM65644.1 401 unknown [Arabidopsis thaliana]
GI:18412023 GenBank AAN15343.1 401 Unknown protein [Arabidopsis thaliana]
GI:18412023 GenBank ACX19642.1 401 Sequence 47894 from patent US 7569389
GI:18412023 GenBank AEE36121.1 401 sodium Bile acid symporter family [Arabidopsis thaliana]
GI:18412023 SwissProt Q93YR2.1 401 RecName: Full=Probable sodium/metabolite cotransporter BASS1, chloroplastic; AltName: Full=Bile acid transporter 2; AltName: Full=Bile acid-sodium symporter family protein 1; Flags: Precursor [Arabidopsis thaliana]

Related Sequences to LMP011048 proteins

Reference Database Accession Length Protein Name
GI:18412023 GenBank EFH65458.1 399 bile acid:sodium symporter family protein [Arabidopsis lyrata subsp. lyrata]
GI:18412023 GenBank EOA34164.1 401 hypothetical protein CARUB_v10021666mg [Capsella rubella]
GI:18412023 RefSeq XP_002889199.1 399 bile acid:sodium symporter family protein [Arabidopsis lyrata subsp. lyrata]
GI:18412023 RefSeq XP_006301266.1 401 hypothetical protein CARUB_v10021666mg [Capsella rubella]
GI:18412023 RefSeq XP_006389975.1 402 hypothetical protein EUTSA_v10018656mg [Eutrema salsugineum]
GI:18412023 RefSeq XP_010417455.1 402 PREDICTED: probable sodium/metabolite cotransporter BASS1, chloroplastic [Camelina sativa]