Gene/Proteome Database (LMPD)

LMPD ID
LMP010479
Gene ID
827492
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
homeobox-leucine zipper protein HDG4
Gene Symbol
HDG4
Synonyms
DL4890C; FCAALL.102; HDG4; homeodomain GLABROUS 4
Alternate Names
homeobox-leucine zipper protein HDG4
Chromosome
4
Summary
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family.
Orthologs
View orthologs and multiple alignments for HDG4

Proteins

homeobox-leucine zipper protein HDG4
Refseq ID NP_193506
Protein GI 30684155
UniProt ID Q8L7H4
mRNA ID NM_117880
Length 709
RefSeq Status REVIEWED
METKDKKEKGHMVLNSDNVFGSVSSSPTTTIQNPNYFTSFENPNFPYIFPKEEYEVMSKIESGSGKSTGSGHDPVENTAIEQEPPAAKKKRYHRHTASQIQQMEALFKENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQNIQSNFQCLFCSTCGHNLRLENARLRQELDRLRSIVSMRNPSPSQEITPETNKNNNDNMLIAEEEKAIDMELAVSCARELAKMCDINEPLWNKKRLDNESVCLNEEEYKKMFLWPLMNDDDRFRREASRANAVIMLNCITLVKAFLDADKWSEMFFPIVSSAKTAQIISSGASGPSGTLLLMFAELQVVSPLVPTREAYFLRYVEQNAEEGKWMVVDFPIDRIKPASATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHVQDEVVREFVESGVAFGAERWLSVLKRQCERMASLMATNITDLGVIPSVEARKNLMKLSQRMVKTFCLNIINSHGQAPTKDTVKIVSRKVCGGLVPCAVSVTLLPYSHQQVFDLLRDNQRLSQLEILFMGSSFQEVAHIANGSHLGNSISLLRINVESNSSHNVELMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGFSVVPVNPSDGVEGSSVSSPSCLLTVAIQVLGSNVTTERLDLSTVSVINHRICATVNRITSALVNDVGN

Gene Information

Entrez Gene ID
827492
Gene Name
homeobox-leucine zipper protein HDG4
Gene Symbol
HDG4
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0008289 IEA:InterPro F lipid binding
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003700 ISS:TAIR F sequence-specific DNA binding transcription factor activity
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR001356 Homeobox domain
IPR017970 Homeobox, conserved site
IPR009057 Homeodomain-like
IPR002913 START_lipid-bd_dom

UniProt Annotations

Entry Information

Gene Name
homeobox-leucine zipper protein HDG4
Protein Entry
HDG4_ARATH
UniProt ID
Q8L7H4
Species
Arabidopsis

Comments

Comment Type Description
Function Probable transcription factor. {ECO:0000250}.
Interaction Q9FX31:HDG11; NbExp=2; IntAct=EBI-4450571, EBI-4443010;
Similarity Belongs to the HD-ZIP homeobox family. Class IV subfamily. {ECO:0000305}.
Similarity Contains 1 START domain. {ECO:0000255|PROSITE- ProRule:PRU00197}.
Similarity Contains 1 homeobox DNA-binding domain. {ECO:0000255|PROSITE-ProRule:PRU00108}.
Subcellular Location Nucleus {ECO:0000305}.
Tissue Specificity Expressed in flowers. {ECO:0000269|PubMed:16778018}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010479 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
30684155 RefSeq NP_193506 709 homeobox-leucine zipper protein HDG4

Identical Sequences to LMP010479 proteins

Reference Database Accession Length Protein Name
GI:30684155 GenBank AAM91634.1 709 putative GLABRA2 protein [Arabidopsis thaliana]
GI:30684155 GenBank AEE83937.1 709 homeobox-leucine zipper protein HDG4 [Arabidopsis thaliana]
GI:30684155 SwissProt Q8L7H4.1 709 RecName: Full=Homeobox-leucine zipper protein HDG4; AltName: Full=HD-ZIP protein HDG4; AltName: Full=Homeodomain GLABRA 2-like protein 4; AltName: Full=Homeodomain transcription factor HDG4; AltName: Full=Protein HOMEODOMAIN GLABROUS 4 [Arabidopsis thaliana]

Related Sequences to LMP010479 proteins

Reference Database Accession Length Protein Name
GI:30684155 EMBL CAB10551.1 661 GLABRA2 like protein [Arabidopsis thaliana]
GI:30684155 EMBL CAB78774.1 661 GLABRA2 like protein [Arabidopsis thaliana]
GI:30684155 GenBank ACC28677.1 661 Sequence 248 from patent US 7345217
GI:30684155 GenBank ADF12979.1 661 Sequence 598 from patent US 7663025
GI:30684155 GenBank AEI23647.1 661 Sequence 2226 from patent US 7960612
GI:30684155 RefSeq XP_010449572.1 733 PREDICTED: homeobox-leucine zipper protein HDG4-like [Camelina sativa]