Gene/Proteome Database (LMPD)

LMPD ID
LMP010478
Gene ID
817798
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
homeobox-leucine zipper protein HDG3
Gene Symbol
HDG3
Synonyms
homeodomain GLABROUS 3; T32F6.11; T32F6_11
Alternate Names
homeobox-leucine zipper protein HDG3
Chromosome
2
Summary
Encodes a homeobox-leucine zipper family protein belonging to the HD-ZIP IV family. Together with ATML1 and PDF2, it is involved in cotyledon development.
Orthologs
View orthologs and multiple alignments for HDG3

Proteins

homeobox-leucine zipper protein HDG3
Refseq ID NP_180796
Protein GI 186504743
UniProt ID Q9ZV65
mRNA ID NM_128796
Length 725
RefSeq Status REVIEWED
MSQSNMVPVANNGDNNNDNENNNNNNNNGGTDNTNAGNDSGDQDFDSGNTSSGNHGEGLGNNQAPRHKKKKYNRHTQLQISEMEAFFRECPHPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQERFENSELRNLNNHLRSENQRLREAIHQALCPKCGGQTAIGEMTFEEHHLRILNARLTEEIKQLSVTAEKISRLTGIPVRSHPRVSPPNPPPNFEFGMGSKGNVGNHSRETTGPADANTKPIIMELAFGAMEELLVMAQVAEPLWMGGFNGTSLALNLDEYEKTFRTGLGPRLGGFRTEASRETALVAMCPTGIVEMLMQENLWSTMFAGIVGRARTHEQIMADAAGNFNGNLQIMSAEYQVLSPLVTTRESYFVRYCKQQGEGLWAVVDISIDHLLPNINLKCRRRPSGCLIQEMHSGYSKVTWVEHVEVDDAGSYSIFEKLICTGQAFAANRWVGTLVRQCERISSILSTDFQSVDSGDHITLTNHGKMSMLKIAERIARTFFAGMTNATGSTIFSGVEGEDIRVMTMKSVNDPGKPPGVIICAATSFWLPAPPNTVFDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLRHGHTSKSKMMIVQETSTDPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAIFPDGTGKPGGKEGGSLLTISFQMLVESGPEARLSVSSVATTENLIRTTVRRIKDLFPCQTA

Gene Information

Entrez Gene ID
817798
Gene Name
homeobox-leucine zipper protein HDG3
Gene Symbol
HDG3
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IEA:UniProtKB-KW C nucleus
GO:0008289 IEA:InterPro F lipid binding
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003700 ISS:TAIR F sequence-specific DNA binding transcription factor activity
GO:0048825 IGI:TAIR P cotyledon development
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR001356 Homeobox domain
IPR017970 Homeobox, conserved site
IPR009057 Homeodomain-like
IPR023393 START-like domain
IPR002913 START_lipid-bd_dom

UniProt Annotations

Entry Information

Gene Name
homeobox-leucine zipper protein HDG3
Protein Entry
HDG3_ARATH
UniProt ID
Q9ZV65
Species
Arabidopsis

Comments

Comment Type Description
Function Probable transcription factor. {ECO:0000250}.
Sequence Caution Sequence=AAC69941.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
Similarity Belongs to the HD-ZIP homeobox family. Class IV subfamily. {ECO:0000305}.
Similarity Contains 1 START domain. {ECO:0000255|PROSITE- ProRule:PRU00197}.
Similarity Contains 1 homeobox DNA-binding domain. {ECO:0000255|PROSITE-ProRule:PRU00108}.
Subcellular Location Nucleus {ECO:0000255|PROSITE- ProRule:PRU00108, ECO:0000269|Ref.1}.
Tissue Specificity Expressed in siliques. {ECO:0000269|PubMed:16778018, ECO:0000269|Ref.1}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010478 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
186504743 RefSeq NP_180796 725 homeobox-leucine zipper protein HDG3

Identical Sequences to LMP010478 proteins

Reference Database Accession Length Protein Name
GI:186504743 EMBL CCF77261.1 725 unnamed protein product [Arabidopsis thaliana]
GI:186504743 GenBank ADF08166.1 725 Sequence 2656 from patent US 7659446
GI:186504743 GenBank AEC08674.1 725 homeobox-leucine zipper protein HDG3 [Arabidopsis thaliana]
GI:186504743 GenBank AFC09005.1 725 Sequence 2656 from patent US 8110725
GI:186504743 GenBank AGM80991.1 725 Sequence 2656 from patent US 8426678
GI:186504743 GenBank AGM83010.1 725 Sequence 326 from patent US 8426685

Related Sequences to LMP010478 proteins

Reference Database Accession Length Protein Name
GI:186504743 gnl TIGR 721 putative homeodomain transcription factor [Arabidopsis thaliana]
GI:186504743 RefSeq XP_010510028.1 732 PREDICTED: homeobox-leucine zipper protein HDG3-like [Camelina sativa]
GI:186504743 RefSeq XP_010414006.1 733 PREDICTED: homeobox-leucine zipper protein HDG3-like isoform X1 [Camelina sativa]
GI:186504743 RefSeq XP_010469602.1 731 PREDICTED: homeobox-leucine zipper protein HDG3-like [Camelina sativa]
GI:186504743 RefSeq XP_010469603.1 731 PREDICTED: homeobox-leucine zipper protein HDG3-like [Camelina sativa]
GI:186504743 RefSeq XP_010469604.1 731 PREDICTED: homeobox-leucine zipper protein HDG3-like [Camelina sativa]