Gene/Proteome Database (LMPD)

LMPD ID
LMP010422
Gene ID
835917
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
glycerophosphodiester phosphodiesterase like 6
Gene Symbol
SVL4
Synonyms
K21L19.4; K21L19_4; SHV3-like 4; SVL4
Alternate Names
glycerophosphodiester phosphodiesterase like 6
Chromosome
5
EC Number
3.1.4.46

Proteins

glycerophosphodiester phosphodiesterase like 6
Refseq ID NP_200613
Protein GI 22327932
UniProt ID Q9FGT9
mRNA ID NM_125190
Length 753
RefSeq Status REVIEWED
MLRFFILFSLFLHSSVAAPKTPAAAAAVPAKKWLTLNGQEPAVVARGGFSGLFPESSISANDLAIGTSSPGFTMLCNLQMTKDGVGLCLSDIRLDNATTISSVFPKAQKTYKVNGQDLKGWFVIDYDADTIFNKVTLVQNIFSRPSIFDGQMSVSAVEDVLGTKPPKFWLSVQYDAFYMEHKLSPAEYLRSLRFRGINVISSPEIGFLKSIGMDAGRAKTKLIFEFKDPEAVEPTTNKKYSEIQQNLAAIKAFASGVLVPKDYIWPIDSAKYLKPATTFVADAHKAGLEVYASGFANDLRTSFNYSYDPSAEYLQFVDNGQFSVDGVITDFPPTASQSITCFSHQNGNLPKAGHALVITHNGASGDYPGCTDLAYQKAIDDGADIIDCSVQMSKDGIAFCHDAADLSASTTARTTFMSRATSVPEIQPTNGIFSFDLTWAEIQSVKPQIENPFTATGFQRNPANKNAGKFTTLADFLELGKAKAVTGVLINIQNAAYLASKKGLGVVDVVKSALTNSTLDKQSTQKVLIQSDDSSVLSSFEAVPPYTRVLSIDKEIGDAPKTSIEEIKKHADAVNLLRTSLITVSQSFATGKTNVVEEMHKANISVYVSVLRNEYIAIAFDYFSDPTIELATFIAGRGVDGVITEFPATATRYLRSPCSDLNKDQPYAILPADAGALLTVADKEAQLPAIPPNPPLDAKDVIDPPLPPVAKLASNGTEGGPPQTPPRSGTVAIAANLSLSLLAMMALGLLYTA

Gene Information

Entrez Gene ID
835917
Gene Name
glycerophosphodiester phosphodiesterase like 6
Gene Symbol
SVL4
Species
Arabidopsis thaliana

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0031225 TAS:TAIR C anchored component of membrane
GO:0048046 IDA:TAIR C apoplast
GO:0008889 IEA:InterPro F glycerophosphodiester phosphodiesterase activity
GO:0006071 IEA:InterPro P glycerol metabolic process
GO:0006629 IEA:InterPro P lipid metabolic process

Domain Information

InterPro Annotations

Accession Description
IPR004129 Glycerophosphoryl diester phosphodiesterase
IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain

UniProt Annotations

Entry Information

Gene Name
glycerophosphodiester phosphodiesterase like 6
Protein Entry
GPDL6_ARATH
UniProt ID
Q9FGT9
Species
Arabidopsis

Comments

Comment Type Description
Catalytic Activity A glycerophosphodiester + H(2)O = an alcohol + sn-glycerol 3-phosphate. {ECO:0000250|UniProtKB:Q7Y208}.
Similarity Belongs to the glycerophosphoryl diester phosphodiesterase family. {ECO:0000305}.
Similarity Contains 2 GP-PDE domains. {ECO:0000255}.
Subcellular Location Membrane {ECO:0000255}; Single-pass membrane protein {ECO:0000255}.
Tissue Specificity Expressed in flowers and siliques. {ECO:0000269|PubMed:21323773}.

Identical and Related Proteins

Unique RefSeq proteins for LMP010422 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
22327932 RefSeq NP_200613 753 glycerophosphodiester phosphodiesterase like 6

Identical Sequences to LMP010422 proteins

Reference Database Accession Length Protein Name
GI:22327932 EMBL CBC04205.1 753 unnamed protein product [Arabidopsis thaliana]
GI:22327932 EMBL CBC01322.1 753 unnamed protein product [Arabidopsis thaliana]
GI:22327932 EMBL CBC06253.1 753 unnamed protein product [Arabidopsis thaliana]
GI:22327932 EMBL CBC38063.1 753 unnamed protein product [Arabidopsis thaliana]
GI:22327932 EMBL CBC76138.1 753 unnamed protein product [Arabidopsis thaliana]
GI:22327932 gnl TAIR 753 glycerophosphodiester phosphodiesterase like 6 [Arabidopsis thaliana]

Related Sequences to LMP010422 proteins

Reference Database Accession Length Protein Name
GI:22327932 DBBJ BAA96908.1 750 unnamed protein product [Arabidopsis thaliana]
GI:22327932 EMBL CAW40522.1 750 unnamed protein product [Arabidopsis thaliana]
GI:22327932 GenBank EFH42505.1 754 glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata]
GI:22327932 gnl TAIR 750 glycerophosphodiester phosphodiesterase like 7 [Arabidopsis thaliana]
GI:22327932 RefSeq XP_002866246.1 754 glycerophosphoryl diester phosphodiesterase family protein [Arabidopsis lyrata subsp. lyrata]
GI:22327932 RefSeq XP_010453117.1 754 PREDICTED: glycerophosphodiester phosphodiesterase GDPDL6 [Camelina sativa]