Gene/Proteome Database (LMPD)
LMPD ID
LMP009784
Gene ID
Species
Arabidopsis thaliana (Arabidopsis)
Gene Name
acyl-coenzyme A oxidase 3
Gene Symbol
Synonyms
acyl-CoA oxidase 3; ATACX3
Alternate Names
acyl-coenzyme A oxidase 3
Chromosome
1
EC Number
1.3.3.6
Summary
Encodes an acyl-CoA oxidase with specificity for medium chain fatty acids.
Orthologs
Proteins
| acyl-coenzyme A oxidase 3 | |
|---|---|
| Refseq ID | NP_172119 |
| Protein GI | 15220946 |
| UniProt ID | P0CZ23 |
| mRNA ID | NM_100511 |
| Length | 675 |
| RefSeq Status | REVIEWED |
| MSDNRALRRAHVLANHILQSNPPSSNPSLSRELCLQYSPPELNESYGFDVKEMRKLLDGHNVVDRDWIYGLMMQSNLFNRKERGGKIFVSPDYNQTMEQQREITMKRIWYLLENGVFKGWLTETGPEAELRKLALLEVCGIYDHSVSIKVGVHFFLWGNAVKFFGTKRHHEKWLKNTEDYVVKGCFAMTELGHGSNVRGIETVTTYDPKTEEFVINTPCESAQKYWIGGAANHATHTIVFSQLHINGTNQGVHAFIAQIRDQDGSICPNIRIADCGHKIGLNGVDNGRIWFDNLRIPRENLLNAVADVSSDGKYVSSIKDPDQRFGAFMAPLTSGRVTIASSAIYSAKVGLSIAIRYSLSRRAFSVTANGPEVLLLDYPSHQRRLLPLLAKTYAMSFAANELKMIYVKRTPETNKAIHVVSSGFKAVLTWHNMHTLQECREAVGGQGVKTENLVGQLKGEFDVQTTFEGDNNVLMQQVSKALFAEYVSCKKRNKPFKGLGLEHMNSPRPVLPTQLTSSTLRCSQFQTNVFCLRERDLLEQFTSEVAQLQGRGESREFSFLLSHQLAEDLGKAFTEKAILQTILDAEAKLPTGSVKDVLGLVRSMYALISLEEDPSLLRYGYLSQDNVGDVRREVSKLCGELRPHALALVTSFGIPDSFLSPIAFNWVEANAWSSV | |
Gene Information
Entrez Gene ID
Gene Name
acyl-coenzyme A oxidase 3
Gene Symbol
Species
Arabidopsis thaliana
Gene Ontology (GO Annotations)
| GO ID | Source | Type | Description |
|---|---|---|---|
| GO:0005777 | IEA:UniProtKB-KW | C | peroxisome |
| GO:0003995 | IEA:InterPro | F | acyl-CoA dehydrogenase activity |
| GO:0003997 | TAS:TAIR | F | acyl-CoA oxidase activity |
| GO:0050660 | IEA:InterPro | F | flavin adenine dinucleotide binding |
| GO:0006635 | TAS:TAIR | P | fatty acid beta-oxidation |
| GO:0033540 | IEA:UniProtKB-UniPathway | P | fatty acid beta-oxidation using acyl-CoA oxidase |
| GO:0051791 | TAS:TAIR | P | medium-chain fatty acid metabolic process |
KEGG Pathway Links
| KEGG Pathway ID | Description |
|---|---|
| ath01040 | Biosynthesis of unsaturated fatty acids |
| ath_M00113 | Jasmonic acid biosynthesis |
| ath04146 | Peroxisome |
| ath_M00087 | beta-Oxidation |
Domain Information
UniProt Annotations
Entry Information
Comments
| Comment Type | Description |
|---|---|
| Biophysicochemical Properties | Kinetic parameters: KM=3.7 uM for lauroyl-CoA; pH dependence: Optimum pH is 8.5-9.0.; |
| Catalytic Activity | Acyl-CoA + O(2) = trans-2,3-dehydroacyl-CoA + H(2)O(2). |
| Cofactor | Name=FAD; Xref=ChEBI:CHEBI:57692; |
| Developmental Stage | Induced by seed imbibition with a peak at day 2 and then declines steadily until day 7. Not detected in developing seeds. Constitutive expression in root axis. {ECO:0000269|PubMed:10859203}. |
| Function | Catalyzes the desaturation of medium-chain acyl-CoAs to 2-trans-enoyl-CoAs. Active on C8:0- to C14:0-CoA with a maximal activity on C12:0-CoA. |
| Induction | Not induced by dehydration or abscisic acid (ABA). {ECO:0000269|PubMed:15141068}. |
| Pathway | Lipid metabolism; peroxisomal fatty acid beta-oxidation. |
| Similarity | Belongs to the acyl-CoA oxidase family. {ECO:0000305}. |
| Subcellular Location | Peroxisome {ECO:0000269|PubMed:10918060}. |
| Tissue Specificity | Most abundant in flowers and senescing rosette leaves. Lower expression in hypocotyls, stems, young rosette leaves, cotyledons, cauline leaves and root tip of young seedlings. {ECO:0000269|PubMed:10859203, ECO:0000269|PubMed:10918060}. |
Identical and Related Proteins
Unique RefSeq proteins for LMP009784 (as displayed in Record Overview)
| Protein GI | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| 15220946 | RefSeq | NP_172119 | 675 | acyl-coenzyme A oxidase 3 |
Identical Sequences to LMP009784 proteins
| Reference | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| GI:15220946 | EMBL | CBU96018.1 | 675 | unnamed protein product [Arabidopsis thaliana] |
| GI:15220946 | GenBank | AEE27972.1 | 675 | acyl-coenzyme A oxidase 3 [Arabidopsis thaliana] |
| GI:15220946 | GenBank | AGX52695.1 | 675 | Sequence 5745 from patent US 8541208 |
| GI:15220946 | GenBank | AGX57632.1 | 675 | Sequence 15607 from patent US 8541208 |
| GI:15220946 | GenBank | AGX63416.1 | 675 | Sequence 26936 from patent US 8541208 |
| GI:15220946 | SwissProt | P0CZ23.1 | 675 | RecName: Full=Acyl-coenzyme A oxidase 3, peroxisomal; Short=AOX 3; Short=Acyl-CoA oxidase 3; AltName: Full=Medium-chain acyl-CoA oxidase; Short=AtCX3; Flags: Precursor [Arabidopsis thaliana] |
Related Sequences to LMP009784 proteins
| Reference | Database | Accession | Length | Protein Name |
|---|---|---|---|---|
| GI:15220946 | GenBank | AAF73843.1 | 675 | acyl-CoA oxidase ACX3 [Arabidopsis thaliana] |
| GI:15220946 | GenBank | AAO00645.1 | 675 | Sequence 8 from patent US 6489461 |
| GI:15220946 | GenBank | EFH65856.1 | 675 | acyl-CoA oxidase ACX3 [Arabidopsis lyrata subsp. lyrata] |
| GI:15220946 | GenBank | EOA39249.1 | 675 | hypothetical protein CARUB_v10012245mg [Capsella rubella] |
| GI:15220946 | RefSeq | XP_002889597.1 | 675 | acyl-CoA oxidase ACX3 [Arabidopsis lyrata subsp. lyrata] |
| GI:15220946 | RefSeq | XP_006306351.1 | 675 | hypothetical protein CARUB_v10012245mg [Capsella rubella] |