LIPID MAPS

Gene/Proteome Database (LMPD)

LMPD ID

LMP009138

Gene ID

32340

Species

Drosophila melanogaster (Drosophila)

Gene Name

retinal degeneration B

Gene Symbol

rdgB

Synonyms

CG11111; Dmel\CG11111; DrdgB; DrdgBalpha; hypoF; ota1; PITP; RdgB; RdgBalpha; x36

Chromosome

Map Location

12C1-12C4

Proteins

retinal degeneration B, isoform A
Refseq ID	NP_727733
Protein GI	24641867
UniProt ID	P43125
mRNA ID	NM_167382
Length	1259
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRRYLERKTVSSCCLMVFQTT

retinal degeneration B, isoform B
Refseq ID	NP_511149
Protein GI	24641869
UniProt ID	P43125
mRNA ID	NM_078594
Length	1250
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRRLHEQATNEN

retinal degeneration B, isoform C
Refseq ID	NP_001014741
Protein GI	62473700
UniProt ID	P43125
mRNA ID	NM_001014741
Length	1259
RefSeq Status	REVIEWED
Protein sequence is identical to GI:62473687 (mRNA isoform)

retinal degeneration B, isoform D
Refseq ID	NP_001014740
Protein GI	62473687
UniProt ID	P43125
mRNA ID	NM_001014740
Length	1259
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRRYLERKTVSSCCLMVFQTT

retinal degeneration B, isoform E
Refseq ID	NP_001162748
Protein GI	281360840
UniProt ID	E1JJK9
mRNA ID	NM_001169277
Length	1241
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRR

retinal degeneration B, isoform F
Refseq ID	NP_001162749
Protein GI	281360842
UniProt ID	P43125
mRNA ID	NM_001169278
Length	1250
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRRLHEQATNEN

retinal degeneration B, isoform G
Refseq ID	NP_001162750
Protein GI	281360844
UniProt ID	E1JJK8
mRNA ID	NM_001169279
Length	1237
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISVQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRRLHEQATNEN

retinal degeneration B, isoform H
Refseq ID	NP_001162751
Protein GI	281360846
UniProt ID	E1JJK6
mRNA ID	NM_001169280
Length	1263
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQSKKPHAKTAPRRHVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRRLHEQATNEN

retinal degeneration B, isoform I
Refseq ID	NP_001259534
Protein GI	442616287
UniProt ID	M9PJM8
mRNA ID	NM_001272605
Length	1277
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQSKKPHAKTAPRRHVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRSNETGLSSPIRSGYLKRKTYLSHH

retinal degeneration B, isoform J
Refseq ID	NP_001259535
Protein GI	442616289
UniProt ID	M9PEJ5
mRNA ID	NM_001272606
Length	1297
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQSKKPHAKTAPRRHVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRSNAFELQLANISPSSSNINSPSSGNHILLAQLIENAIEKDTPAG

retinal degeneration B, isoform K
Refseq ID	NP_001285229
Protein GI	665391231
UniProt ID	X2JF93
mRNA ID	NM_001298300
Length	1284
RefSeq Status	REVIEWED
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESHGEGSGVEIIINEPYKDGPGGNGQYTKKIYHVGNHLPGWIKSLLPKSALTVEEEAWNAYPYTRTRYTCPFVEKFSLDIETYYYPDNGYQDNVFQLSGSDLRNRIVDVIDIVKDQLWGGDYVKEEDPKHFVSDKTGRGPLAEDWLEEYWREVKGKKQPTPRNMSLMTAYKICRVEFRYWGMQTKLEKFIHDVALRKMMLRAHRQAWAWQDEWFGLTIEDIRELERQTQLALAKKMGGGEECSDDSVSEPYVSTAATAASTTGSERKKSAPAVPPIVTQQPPSAEASSDEEGEEEEDDDEDENDAIGTGVDLSANQGGSAQRSRSQSIQMAQKGKFGSKGALHSPVGSAHSFDLQVANWRMERLEVDSKSNSDEEFFDCLDTNETNSLAKWSSLELLGEGDDSPPPHGGPSSAASVGGRGNSRQEDSIFNQDFLMRVASERGNKRQLRSSASVDRSHDSSPPGSPSTPSCPTTILILVVHAGSVLDAASELTAKKSDVTTFRGSFEAVMRQHYPSLLTHVTIKMVPCPSICTDALGILSSLSPYSFDASPSAADIPNIADVPIGAIPLLSVASPEFHETVNKTVAAANIVYHEFLKSEEGHGFSGQIVMLGDSMGSLLAYEALCRSNGSQPGTASGASNSGGDAATNINTHNPLSPRNSRLDDDERFIEADLDAKRLLVAPSPRRRRSSSSSDSRATKLDFEVCDFFMFGSPLSVVLAARKLHDAKAALPRPNCHQVYNLFHPTDPIASRLEPLLSARFSILAPVNVPRYAKYPLGNGQPLHLLEVIQSHPQHFNDGNNLLAGRRLSDASMQSTISGLIENVSLSTIHALQNKWWGTKRLDYALYCPEGLSNFPAHALPHLFHASYWESPDVIAFILRQIGKFEGIPFVGSNDDKDNASFHPGQPREKWIKKRTSVKLKNVAANHRANDVIVQEGREQRLNARFMYGPLDMITLHGEKVDVHIMKDPPAGEWTFLSTEVTDKNGRISYSIPDQVSLGYGIYPVKMVVRGDHTSVDCYMAVVPPLTECVVFSIDGSFTASMSVTGRDPKVRAGAVDVCRHWQELGYLLIYITGRPDMQQQRVVSWLSQHNFPHGLISFADGLSTDPLGHKTAYLNNLVQNHGISITAAYGSSKDISVYTNVGMRTDQIFIVGKVGKKLQSNATVLSDGYAAHLAGLQAVGGSRPAKGNARMVIPRGCFNLPGQTANPRRRSNAFELQLANISPSSSNINSPSSGNHILLAQLIENAIEKDTPAG

Gene Information

Entrez Gene ID

32340

Gene Name

retinal degeneration B

Gene Symbol

rdgB

Species

Drosophila melanogaster

Gene Ontology (GO Annotations)

GO ID	Source	Type	Description
GO:0016021	TAS:FlyBase	C	integral component of membrane
GO:0005887	ISS:FlyBase	C	integral component of plasma membrane
GO:0005886	IDA:FlyBase	C	plasma membrane
GO:0016029	NAS:FlyBase	C	subrhabdomeral cisterna
GO:0005388	ISS:FlyBase	F	calcium-transporting ATPase activity
GO:0046872	IEA:InterPro	F	metal ion binding
GO:0008525	IDA:FlyBase	F	phosphatidylcholine transporter activity
GO:0008526	IDA:FlyBase	F	phosphatidylinositol transporter activity
GO:0070588	ISS:GOC	P	calcium ion transmembrane transport
GO:0016059	IMP:FlyBase	P	deactivation of rhodopsin mediated signaling
GO:0046488	IMP:FlyBase	P	phosphatidylinositol metabolic process
GO:0015914	IDA:GOC	P	phospholipid transport
GO:0007602	IMP:FlyBase	P	phototransduction
GO:0016056	IMP:FlyBase	P	rhodopsin mediated signaling pathway
GO:0007608	IMP:FlyBase	P	sensory perception of smell
GO:0007601	IEA:UniProtKB-KW	P	visual perception

Domain Information

InterPro Annotations

Accession	Description
IPR004177	DDHD
IPR023214	HAD-like domain
IPR013209	LNS2, Lipin/Ned1/Smp2
IPR001666	Phosphatidylinositol transfer protein
IPR023393	START-like domain

UniProt Annotations

Entry Information

Gene Name

retinal degeneration B

Protein Entry

RDGB_DROME

UniProt ID

X2JF93

Species

Drosophila

Comments

Comment Type	Description
Alternative Products	Event=Alternative splicing; Named isoforms=2; Name=A; Synonyms=C, D; IsoId=P43125-1; Sequence=Displayed; Note=No experimental confirmation available.; Name=B; IsoId=P43125-2; Sequence=VSP_014533;
Disruption Phenotype	Flies exhibit rapid light-induced retinal degeneration. {ECO:0000269\|PubMed:1903119}.
Function	May control phosphatidylinositol concentration in transport vesicles from the subrhabdomeric cisternae (SRC) to the rhabdomere. May function as a calcium transporter. {ECO:0000269\|PubMed:1903119}.
Sequence Caution	Sequence=AAR82797.1; Type=Miscellaneous discrepancy; Note=Intron retention.; Evidence={ECO:0000305}; Sequence=CAA41044.1; Type=Frameshift; Positions=1054, 1158; Evidence={ECO:0000305};
Similarity	Belongs to the PtdIns transfer protein family. PI transfer class IIA subfamily. {ECO:0000305}.
Similarity	Contains 1 DDHD domain. {ECO:0000255\|PROSITE- ProRule:PRU00378}.
Tissue Specificity	Expressed in adult heads, not detected in bodies. {ECO:0000269\|PubMed:1903119}.

Identical and Related Proteins

Unique RefSeq proteins for LMP009138 (as displayed in Record Overview)

Protein GI	Database	Accession	Length	Protein Name
24641867	RefSeq	NP_727733	1259	retinal degeneration B, isoform A
24641869	RefSeq	NP_511149	1250	retinal degeneration B, isoform B
62473687	RefSeq	NP_001014740	1259	retinal degeneration B, isoform D
281360840	RefSeq	NP_001162748	1241	retinal degeneration B, isoform E
281360842	RefSeq	NP_001162749	1250	retinal degeneration B, isoform F
281360844	RefSeq	NP_001162750	1237	retinal degeneration B, isoform G
281360846	RefSeq	NP_001162751	1263	retinal degeneration B, isoform H
442616287	RefSeq	NP_001259534	1277	retinal degeneration B, isoform I
442616289	RefSeq	NP_001259535	1297	retinal degeneration B, isoform J
665391231	RefSeq	NP_001285229	1284	retinal degeneration B, isoform K

Identical Sequences to LMP009138 proteins

Reference	Database	Accession	Length	Protein Name
GI:24641867	GenBank	ACL89970.1	1259	rdgB-PA [synthetic construct]
GI:62473687	GenBank	ACL89970.1	1259	rdgB-PA [synthetic construct]
GI:281360842	gnl	FlyBase	1250	retinal degeneration B, isoform B [Drosophila melanogaster]
GI:24641869	gnl	FlyBase	1250	retinal degeneration B, isoform B [Drosophila melanogaster]
GI:24641867	gnl	FlyBase	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:62473687	gnl	FlyBase	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:62473687	gnl	FlyBase	1259	retinal degeneration B, isoform D [Drosophila melanogaster]
GI:24641867	gnl	FlyBase	1259	retinal degeneration B, isoform D [Drosophila melanogaster]
GI:281360840	gnl	FlyBase	1241	retinal degeneration B, isoform E [Drosophila melanogaster]
GI:281360842	gnl	FlyBase	1250	retinal degeneration B, isoform F [Drosophila melanogaster]
GI:24641869	gnl	FlyBase	1250	retinal degeneration B, isoform F [Drosophila melanogaster]
GI:281360844	gnl	FlyBase	1237	retinal degeneration B, isoform G [Drosophila melanogaster]
GI:281360846	gnl	FlyBase	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:442616287	gnl	FlyBase	1277	retinal degeneration B, isoform I [Drosophila melanogaster]
GI:442616289	gnl	FlyBase	1297	retinal degeneration B, isoform J [Drosophila melanogaster]
GI:665391231	gnl	FlyBase	1284	retinal degeneration B, isoform K [Drosophila melanogaster]
GI:62473687	RefSeq	NP_727733.1	1259	retinal degeneration B, isoform A [Drosophila melanogaster]
GI:281360842	RefSeq	NP_511149.2	1250	retinal degeneration B, isoform B [Drosophila melanogaster]
GI:24641867	RefSeq	NP_001014740.1	1259	retinal degeneration B, isoform D [Drosophila melanogaster]
GI:62473687	RefSeq	NP_001014741.1	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:24641867	RefSeq	NP_001014741.1	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:24641869	RefSeq	NP_001162749.1	1250	retinal degeneration B, isoform F [Drosophila melanogaster]
GI:62473687	SwissProt	P43125.2	1259	RecName: Full=Protein retinal degeneration B; AltName: Full=Probable calcium transporter rdgB [Drosophila melanogaster]
GI:24641867	SwissProt	P43125.2	1259	RecName: Full=Protein retinal degeneration B; AltName: Full=Probable calcium transporter rdgB [Drosophila melanogaster]

Related Sequences to LMP009138 proteins

Reference	Database	Accession	Length	Protein Name
GI:281360840	GenBank	AAK92846.1	1259	GH09970p [Drosophila melanogaster]
GI:62473687	GenBank	EDV47155.1	1258	GG17812 [Drosophila erecta]
GI:24641867	GenBank	EDV47155.1	1258	GG17812 [Drosophila erecta]
GI:24641867	GenBank	EDX01622.1	1258	GE17108 [Drosophila yakuba]
GI:62473687	GenBank	EDX01622.1	1258	GE17108 [Drosophila yakuba]
GI:665391231	GenBank	ACL89970.1	1259	rdgB-PA [synthetic construct]
GI:281360844	gnl	FlyBase	1250	retinal degeneration B, isoform B [Drosophila melanogaster]
GI:281360840	gnl	FlyBase	1259	retinal degeneration B, isoform A [Drosophila melanogaster]
GI:665391231	gnl	FlyBase	1259	retinal degeneration B, isoform A [Drosophila melanogaster]
GI:281360842	gnl	FlyBase	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:24641869	gnl	FlyBase	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:281360840	gnl	FlyBase	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:24641869	gnl	FlyBase	1259	retinal degeneration B, isoform D [Drosophila melanogaster]
GI:281360842	gnl	FlyBase	1259	retinal degeneration B, isoform D [Drosophila melanogaster]
GI:281360840	gnl	FlyBase	1259	retinal degeneration B, isoform D [Drosophila melanogaster]
GI:281360844	gnl	FlyBase	1250	retinal degeneration B, isoform F [Drosophila melanogaster]
GI:62473687	gnl	FlyBase	1250	retinal degeneration B, isoform F [Drosophila melanogaster]
GI:24641867	gnl	FlyBase	1250	retinal degeneration B, isoform F [Drosophila melanogaster]
GI:281360846	gnl	FlyBase	1250	retinal degeneration B, isoform F [Drosophila melanogaster]
GI:442616287	gnl	FlyBase	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:281360844	gnl	FlyBase	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:24641869	gnl	FlyBase	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:281360842	gnl	FlyBase	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:442616289	gnl	FlyBase	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:281360846	gnl	FlyBase	1277	retinal degeneration B, isoform I [Drosophila melanogaster]
GI:442616289	gnl	FlyBase	1277	retinal degeneration B, isoform I [Drosophila melanogaster]
GI:442616287	gnl	FlyBase	1297	retinal degeneration B, isoform J [Drosophila melanogaster]
GI:665391231	gnl	FlyBase	1297	retinal degeneration B, isoform J [Drosophila melanogaster]
GI:281360846	gnl	FlyBase	1297	retinal degeneration B, isoform J [Drosophila melanogaster]
GI:442616287	gnl	FlyBase	1284	retinal degeneration B, isoform K [Drosophila melanogaster]
GI:442616289	gnl	FlyBase	1284	retinal degeneration B, isoform K [Drosophila melanogaster]
GI:665391231	RefSeq	NP_727733.1	1259	retinal degeneration B, isoform A [Drosophila melanogaster]
GI:24641867	RefSeq	NP_511149.2	1250	retinal degeneration B, isoform B [Drosophila melanogaster]
GI:281360846	RefSeq	NP_511149.2	1250	retinal degeneration B, isoform B [Drosophila melanogaster]
GI:281360844	RefSeq	NP_511149.2	1250	retinal degeneration B, isoform B [Drosophila melanogaster]
GI:62473687	RefSeq	NP_511149.2	1250	retinal degeneration B, isoform B [Drosophila melanogaster]
GI:281360840	RefSeq	NP_001014740.1	1259	retinal degeneration B, isoform D [Drosophila melanogaster]
GI:281360842	RefSeq	NP_001014740.1	1259	retinal degeneration B, isoform D [Drosophila melanogaster]
GI:24641869	RefSeq	NP_001014740.1	1259	retinal degeneration B, isoform D [Drosophila melanogaster]
GI:281360840	RefSeq	NP_001014741.1	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:281360842	RefSeq	NP_001014741.1	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:24641869	RefSeq	NP_001014741.1	1259	retinal degeneration B, isoform C [Drosophila melanogaster]
GI:24641867	RefSeq	XP_001978228.1	1258	GG17812 [Drosophila erecta]
GI:62473687	RefSeq	XP_001978228.1	1258	GG17812 [Drosophila erecta]
GI:24641867	RefSeq	XP_002100514.1	1258	GE17108 [Drosophila yakuba]
GI:62473687	RefSeq	XP_002100514.1	1258	GE17108 [Drosophila yakuba]
GI:281360844	RefSeq	NP_001162749.1	1250	retinal degeneration B, isoform F [Drosophila melanogaster]
GI:24641869	RefSeq	NP_001162751.1	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:281360842	RefSeq	NP_001162751.1	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:281360844	RefSeq	NP_001162751.1	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:442616289	RefSeq	NP_001162751.1	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:442616287	RefSeq	NP_001162751.1	1263	retinal degeneration B, isoform H [Drosophila melanogaster]
GI:281360846	RefSeq	NP_001259534.1	1277	retinal degeneration B, isoform I [Drosophila melanogaster]
GI:442616289	RefSeq	NP_001259534.1	1277	retinal degeneration B, isoform I [Drosophila melanogaster]
GI:281360846	RefSeq	NP_001259535.1	1297	retinal degeneration B, isoform J [Drosophila melanogaster]
GI:665391231	RefSeq	NP_001259535.1	1297	retinal degeneration B, isoform J [Drosophila melanogaster]
GI:442616287	RefSeq	NP_001259535.1	1297	retinal degeneration B, isoform J [Drosophila melanogaster]
GI:442616287	RefSeq	NP_001285229.1	1284	retinal degeneration B, isoform K [Drosophila melanogaster]
GI:442616289	RefSeq	NP_001285229.1	1284	retinal degeneration B, isoform K [Drosophila melanogaster]
GI:665391231	SwissProt	P43125.2	1259	RecName: Full=Protein retinal degeneration B; AltName: Full=Probable calcium transporter rdgB [Drosophila melanogaster]