Gene/Proteome Database (LMPD)

LMPD ID
LMP007988
Gene ID
177551
Species
Caenorhabditis elegans (C. elegans)
Gene Name
Protein NHR-8
Gene Symbol
nhr-8
Synonyms
CELE_F33D4.1
Alternate Names
Protein NHR-8
Chromosome
IV

Proteins

Protein NHR-8, isoform a
Refseq ID NP_741445
Protein GI 25144901
UniProt ID Q9XYB7
mRNA ID NM_171382
Length 560
RefSeq Status REVIEWED
MPSSSPSMDESRRSAVPPKEPAGRICTVCSDRANGYNFGVLTCESCKAFFRRNASKHKEIKCPFSDSCQITSASRKFCQACRLNKCFAVGMNSEWLNDLKPKSSIVSGKFKRKKPDMKNNLKVEVDDTEEDLENDDEEQISVPKALLEKLINKANEKSKDRCTCKCQCGFYPITQRLTAYEPKDTTAVNSPQDISFSHHLHHSDSFYSSSTSTLSPMSVISCAPSSHDSSGYNTSQLVTQSPTNYTVSPASIPSSITELSPQMPSQYPPMLSPFQFGVMAQMAAPANFLNFPPMPERTWTPIQAVSTVPVTETLPPNLLEQIHSKIDKYIGVLNEDEITLLEELHVQNEPLNAPLIQWHNPKSIDGVFRIIEEALRRIVNMACQLSLFRELHVDDRKNLLKSGFGELLIVRGLMAYDKSDNSWNHSFGVRGKMEVKVEVLKNPKLEEHYKAHMNLLSTFGEDVRNNEHLMLIFNAAVIFHPHVSNLRDSKRVHSTQAKYFQMLLKLLTFEYGKSRADIAYSNLLNQVVELHRVNRTLLRVFYGLDIAQLDPLIRELCSFE
Protein NHR-8, isoform b
Refseq ID NP_001023169
Protein GI 71987628
UniProt ID Q9XYB7
mRNA ID NM_001027998
Length 559
RefSeq Status REVIEWED
MPSSSPSMDESRRSAVPPKEPAGRICTVCSDRANGYNFGVLTCESCKAFFRRNASKHKEIKCPFSDSCQITSASRKFCQACRLNKCFAVGMNSEWLNDLKPKSSIVSGKFKRKKPDMKNNLKVEVDDTEEDLENDDEEQISVPKALLEKLINKANEKSKDRCTCKCQCGFYPITQRLTAYEPKDTTANSPQDISFSHHLHHSDSFYSSSTSTLSPMSVISCAPSSHDSSGYNTSQLVTQSPTNYTVSPASIPSSITELSPQMPSQYPPMLSPFQFGVMAQMAAPANFLNFPPMPERTWTPIQAVSTVPVTETLPPNLLEQIHSKIDKYIGVLNEDEITLLEELHVQNEPLNAPLIQWHNPKSIDGVFRIIEEALRRIVNMACQLSLFRELHVDDRKNLLKSGFGELLIVRGLMAYDKSDNSWNHSFGVRGKMEVKVEVLKNPKLEEHYKAHMNLLSTFGEDVRNNEHLMLIFNAAVIFHPHVSNLRDSKRVHSTQAKYFQMLLKLLTFEYGKSRADIAYSNLLNQVVELHRVNRTLLRVFYGLDIAQLDPLIRELCSFE

Gene Information

Entrez Gene ID
177551
Gene Name
Protein NHR-8
Gene Symbol
nhr-8
Species
Caenorhabditis elegans

Gene Ontology (GO Annotations)

GO ID Source Type Description
GO:0005634 IDA:WormBase C nucleus
GO:0043565 IEA:InterPro F sequence-specific DNA binding
GO:0003700 IEA:InterPro F sequence-specific DNA binding transcription factor activity
GO:0003707 IEA:InterPro F steroid hormone receptor activity
GO:0008270 IEA:InterPro F zinc ion binding
GO:0042632 IMP:WormBase P cholesterol homeostasis
GO:0006351 IEA:UniProtKB-KW P transcription, DNA-templated

Domain Information

InterPro Annotations

Accession Description
IPR008946 Nuclear hormone receptor, ligand-binding
IPR000536 Nuclear hormone receptor, ligand-binding, core
IPR013088 Zinc finger, NHR/GATA-type
IPR001628 Zinc finger, nuclear hormone receptor-type

UniProt Annotations

Entry Information

Gene Name
Protein NHR-8
Protein Entry
NHR8_CAEEL
UniProt ID
Q9XYB7
Species
C. elegans

Comments

Comment Type Description
Alternative Products Event=Alternative splicing; Named isoforms=2; Name=a; IsoId=Q9XYB7-1; Sequence=Displayed; Name=b; IsoId=Q9XYB7-2; Sequence=VSP_007343; Note=No experimental confirmation available.;
Function Orphan nuclear receptor.
Similarity Belongs to the nuclear hormone receptor family. {ECO:0000305}.
Similarity Contains 1 nuclear receptor DNA-binding domain. {ECO:0000255|PROSITE-ProRule:PRU00407}.
Subcellular Location Nucleus {ECO:0000255|PROSITE- ProRule:PRU00407}.

Identical and Related Proteins

Unique RefSeq proteins for LMP007988 (as displayed in Record Overview)

Protein GI Database Accession Length Protein Name
25144901 RefSeq NP_741445 560 Protein NHR-8, isoform a
71987628 RefSeq NP_001023169 559 Protein NHR-8, isoform b

Identical Sequences to LMP007988 proteins

Reference Database Accession Length Protein Name
GI:25144901 EMBL CCD63761.1 560 Protein NHR-8, isoform a [Caenorhabditis elegans]
GI:71987628 EMBL CCD63762.1 559 Protein NHR-8, isoform b [Caenorhabditis elegans]
GI:25144901 GenBank AAD03684.1 560 nuclear receptor NHR-8 [Caenorhabditis elegans]
GI:25144901 SwissProt Q9XYB7.1 560 RecName: Full=Nuclear hormone receptor family member nhr-8 [Caenorhabditis elegans]

Related Sequences to LMP007988 proteins

Reference Database Accession Length Protein Name
GI:71987628 EMBL CCD63761.1 560 Protein NHR-8, isoform a [Caenorhabditis elegans]
GI:25144901 EMBL CCD63762.1 559 Protein NHR-8, isoform b [Caenorhabditis elegans]
GI:71987628 GenBank AAD03684.1 560 nuclear receptor NHR-8 [Caenorhabditis elegans]
GI:71987628 GenBank ABZ32113.1 676 Sequence 6051 from patent US 7314974
GI:25144901 GenBank ABZ32113.1 676 Sequence 6051 from patent US 7314974
GI:25144901 GenBank EFO93751.1 572 CRE-NHR-8 protein [Caenorhabditis remanei]
GI:25144901 PIR - 676 hypothetical protein F33D4.1 - Caenorhabditis elegans [Caenorhabditis elegans]
GI:71987628 PIR - 676 hypothetical protein F33D4.1 - Caenorhabditis elegans [Caenorhabditis elegans]
GI:71987628 RefSeq NP_741445.1 560 Protein NHR-8, isoform a [Caenorhabditis elegans]
GI:25144901 RefSeq NP_001023169.1 559 Protein NHR-8, isoform b [Caenorhabditis elegans]
GI:25144901 RefSeq XP_003107852.1 572 CRE-NHR-8 protein [Caenorhabditis remanei]
GI:71987628 SwissProt Q9XYB7.1 560 RecName: Full=Nuclear hormone receptor family member nhr-8 [Caenorhabditis elegans]