Microarray analysis of RAW 264.7 cells treated with Kdo2-lipid A (KLA) and compactin (full time course)

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Kdo2-Lipid A / compactin gene array data - treatment:control ratios

KEGG pathway: Selenocompound metabolism (mmu00450)

Legend:graph_icon: View data/graphs for replicates
Gene symbol    Time course plot Accession Description Treatment 30min 1hr 2hr 4hr 8hr 12hr 24hr
BB135800
KLA  Compactin  Compactin+KLA
BB135800 gb|BB135800 RIKEN full-length enriched, adult male bone Mus musculus cDNA clone 9830130K22 3. [BB135800] KLA1.050 0.780 0.750 0.740 1.090 1.250 0.850
Compactin1.070 1.060 1.060 0.940 0.970 0.800 0.790
KLA/Compactin1.160 0.760 0.750 0.820 0.870 0.830 0.770
Ccbl1
KLA  Compactin  Compactin+KLA
NM_172404 cysteine conjugate-beta lyase 1 (Ccbl1), mRNA [NM_172404] KLA0.940 1.010 0.920 0.800 0.700 0.870 1.280
Compactin0.920 1.030 1.060 1.010 1.070 1.050 1.210
KLA/Compactin0.940 1.000 0.860 0.800 0.740 0.910 1.250
Ccbl2
KLA  Compactin  Compactin+KLA
NM_173763 cysteine conjugate-beta lyase 2 (Ccbl2), mRNA [NM_173763] KLA0.890 0.950 0.970 1.140 0.780 0.770 0.830
Compactin0.940 0.890 0.980 1.150 1.030 0.940 0.770
KLA/Compactin1.000 1.060 0.860 1.070 0.890 0.720 0.680
Cth
KLA  Compactin  Compactin+KLA
NM_145953 cystathionase (cystathionine gamma-lyase) (Cth), mRNA [NM_145953] KLA0.850 1.000 1.070 1.550 4.440 4.630 3.370
Compactin0.890 0.930 0.970 0.880 1.080 0.770 1.620
KLA/Compactin0.850 0.910 0.950 1.640 4.490 6.310 3.500
Cth
KLA  Compactin  Compactin+KLA
NM_145953 cystathionase (cystathionine gamma-lyase) (Cth), mRNA [NM_145953] KLA0.940 1.030 0.840 1.770 5.110 5.210 3.830
Compactin0.870 1.030 1.040 0.980 1.020 0.940 1.720
KLA/Compactin0.910 0.980 1.130 1.900 3.350 5.770 4.000
Inmt
KLA  Compactin  Compactin+KLA
NM_009349 indolethylamine N-methyltransferase (Inmt), mRNA [NM_009349] KLA1.070 1.050 1.030 1.010 0.970 1.000 0.890
Compactin1.020 1.000 0.900 0.970 1.080 1.000 0.970
KLA/Compactin0.970 1.060 1.170 1.080 0.930 0.890 0.910
Mars
KLA  Compactin  Compactin+KLA
51491851 methionine-tRNA synthetase KLA1.070 1.030 1.230 0.880 0.790 1.010 1.020
Compactin1.200 1.290 1.100 1.210 1.020 0.990 0.980
KLA/Compactin1.170 1.000 0.940 1.080 1.040 0.940 1.020
Mars
KLA  Compactin  Compactin+KLA
NM_001003913 methionine-tRNA synthetase (Mars), mRNA [NM_001003913] KLA0.970 0.910 0.990 0.950 0.790 0.940 1.120
Compactin1.180 0.970 1.020 1.140 1.260 0.920 0.970
KLA/Compactin1.150 1.060 0.970 0.970 0.880 1.100 1.100
Mars2
KLA  Compactin  Compactin+KLA
NM_175439 methionine-tRNA synthetase 2 (mitochondrial) (Mars2), nuclear gene encoding mitochondrial protein, mRNA [NM_175439] KLA0.940 0.910 0.980 0.960 0.730 0.730 0.670
Compactin1.050 0.910 0.930 0.920 1.070 0.990 0.910
KLA/Compactin0.930 0.920 0.870 0.850 0.760 0.650 0.670
Mars2
KLA  Compactin  Compactin+KLA
NM_175439 methionine-tRNA synthetase 2 (mitochondrial) (Mars2), nuclear gene encoding mitochondrial protein, mRNA [NM_175439] KLA1.000 0.960 1.020 0.920 0.870 0.770 0.690
Compactin1.100 1.040 0.990 1.050 0.950 1.040 0.930
KLA/Compactin0.990 0.900 0.900 0.900 0.850 0.740 0.600
Mtr
KLA  Compactin  Compactin+KLA
AK037599 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130029B16 product:5-methyltetrahydrofolate-homocysteine methyltransferase, full insert sequence. [AK037599] KLA1.040 0.990 1.050 0.860 0.800 0.880 0.800
Compactin1.090 1.040 1.030 1.080 0.930 0.930 0.820
KLA/Compactin1.120 1.020 0.960 0.900 0.780 0.760 0.800
Mtr
KLA  Compactin  Compactin+KLA
NM_001081128 5-methyltetrahydrofolate-homocysteine methyltransferase (Mtr), mRNA [NM_001081128] KLA0.780 0.960 0.840 0.810 0.870 0.660 0.820
Compactin0.910 0.780 0.820 0.710 0.960 1.110 0.860
KLA/Compactin0.810 1.000 0.930 0.800 0.560 0.570 0.840
Mtr
KLA  Compactin  Compactin+KLA
NM_001081128 5-methyltetrahydrofolate-homocysteine methyltransferase (Mtr), mRNA [NM_001081128] KLA0.850 0.990 0.840 0.930 0.920 0.660 0.700
Compactin0.930 0.910 0.890 0.770 0.980 1.120 0.760
KLA/Compactin1.010 1.060 0.960 0.790 0.640 0.620 0.820
Papss1
KLA  Compactin  Compactin+KLA
NM_011863 3-phosphoadenosine 5-phosphosulfate synthase 1 (Papss1), mRNA [NM_011863] KLA1.120 1.100 1.050 0.910 0.760 0.770 0.900
Compactin1.230 1.190 1.150 1.260 1.120 1.030 0.880
KLA/Compactin1.100 1.120 1.000 1.000 0.970 0.820 1.060
Papss2
KLA  Compactin  Compactin+KLA
AK029185 0 day neonate head cDNA, RIKEN full-length enriched library, clone:4831410G12 product:3-phosphoadenosine 5-phosphosulfate synthase 2, full insert sequence. [AK029185] KLA1.010 1.020 0.970 1.000 0.990 0.980 0.990
Compactin0.970 0.910 0.970 1.000 1.080 0.970 0.990
KLA/Compactin0.990 1.030 1.000 1.020 1.050 1.070 0.940
Papss2
KLA  Compactin  Compactin+KLA
NM_011864 3-phosphoadenosine 5-phosphosulfate synthase 2 (Papss2), mRNA [NM_011864] KLA1.060 0.930 0.940 0.970 1.020 1.010 0.990
Compactin1.070 1.010 1.000 1.000 1.080 1.080 0.920
KLA/Compactin0.930 1.060 1.070 1.050 0.990 1.060 1.080
Pstk
KLA  Compactin  Compactin+KLA
AK017332 6 days neonate head cDNA, RIKEN full-length enriched library, clone:5430423O14 product:unclassifiable, full insert sequence. [AK017332] KLA0.690 0.750 0.790 0.690 0.820 0.940 0.780
Compactin1.050 1.040 0.970 0.940 1.140 0.930 1.140
KLA/Compactin0.840 0.610 0.890 0.630 0.820 0.790 0.660
Pstk
KLA  Compactin  Compactin+KLA
NM_001039534 phosphoseryl-tRNA kinase (Pstk), mRNA [NM_001039534] KLA1.120 1.100 0.860 0.780 0.690 0.890 0.950
Compactin1.060 1.150 1.120 1.200 1.200 0.970 1.200
KLA/Compactin1.000 0.840 1.030 0.820 0.630 0.810 1.070
Scly
KLA  Compactin  Compactin+KLA
NM_016717 selenocysteine lyase (Scly), mRNA [NM_016717] KLA0.740 0.860 0.620 0.710 0.800 0.780 0.780
Compactin0.830 1.010 0.840 0.680 0.890 0.710 0.520
KLA/Compactin0.820 0.940 0.740 0.650 0.510 0.670 0.790
Sephs1
KLA  Compactin  Compactin+KLA
NM_175400 selenophosphate synthetase 1 (Sephs1), mRNA [NM_175400] KLA0.980 1.070 1.040 0.940 0.930 0.960 0.940
Compactin1.070 1.010 1.030 1.010 0.910 0.990 1.050
KLA/Compactin1.050 0.900 1.000 1.040 0.940 0.910 0.860
Sephs1
KLA  Compactin  Compactin+KLA
NM_175400 selenophosphate synthetase 1 (Sephs1), mRNA [NM_175400] KLA1.080 1.040 0.990 0.900 0.790 0.880 0.970
Compactin1.280 1.110 1.070 1.120 1.020 0.960 0.820
KLA/Compactin1.160 1.080 1.000 0.920 0.770 0.770 0.900
Sephs2
KLA  Compactin  Compactin+KLA
NM_009266 selenophosphate synthetase 2 (Sephs2), mRNA [NM_009266] KLA1.040 0.970 0.870 0.700 0.740 0.670 0.550
Compactin1.090 1.140 1.050 1.080 1.060 0.920 0.840
KLA/Compactin1.040 0.990 0.770 0.680 0.870 0.730 0.450
Sepsecs
KLA  Compactin  Compactin+KLA
AK088165 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430005G07 product:unclassifiable, full insert sequence. [AK088165] KLA0.990 1.060 1.150 1.570 1.280 1.200 1.230
Compactin1.100 1.100 1.000 1.330 1.280 1.160 1.340
KLA/Compactin1.000 1.010 0.940 1.340 1.540 1.280 1.260
Sepsecs
KLA  Compactin  Compactin+KLA
NM_172490 Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase (Sepsecs), mRNA [NM_172490] KLA1.000 1.060 1.240 1.220 1.170 1.430 1.490
Compactin0.970 0.970 0.950 0.910 0.990 1.040 1.090
KLA/Compactin0.940 1.090 1.210 1.130 1.410 1.390 1.280
Txnrd1
KLA  Compactin  Compactin+KLA
NM_001042523 thioredoxin reductase 1 (Txnrd1), transcript variant 1, mRNA [NM_001042523] KLA1.430 1.820 1.890 1.680 1.860 1.360 1.590
Compactin1.320 1.220 1.260 1.320 1.080 1.010 1.110
KLA/Compactin1.420 1.440 1.990 1.730 1.710 1.500 1.560
Txnrd2
KLA  Compactin  Compactin+KLA
AK008004 adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010001F03 product:ADULT MALE SMALL INTESTINE CDNA, RIKEN FULL-LENGTH ENRICHED LIBRARY, CLONE:2010001F03, FULL INSERT SEQUENCE, full insert sequence. [AK008004] KLA1.220 1.420 1.610 1.960 1.210 1.200 1.500
Compactin1.010 1.050 1.080 1.230 1.110 0.980 0.990
KLA/Compactin1.270 1.760 1.450 2.130 1.250 1.380 1.470
Txnrd2
KLA  Compactin  Compactin+KLA
NM_013711 thioredoxin reductase 2 (Txnrd2), nuclear gene encoding mitochondrial protein, mRNA [NM_013711] KLA0.870 0.780 0.800 0.810 0.840 0.840 0.940
Compactin0.920 0.930 0.870 0.810 0.890 1.040 1.010
KLA/Compactin0.690 0.920 0.850 0.910 0.710 0.850 1.180
Txnrd2
KLA  Compactin  Compactin+KLA
NM_013711 thioredoxin reductase 2 (Txnrd2), nuclear gene encoding mitochondrial protein, mRNA [NM_013711] KLA0.910 0.960 0.960 0.990 0.760 0.750 0.940
Compactin0.980 0.950 0.890 0.900 1.020 0.960 0.870
KLA/Compactin0.900 1.090 0.950 0.830 0.720 0.790 0.970
Txnrd3
KLA  Compactin  Compactin+KLA
NM_153162 thioredoxin reductase 3 (Txnrd3), mRNA [NM_153162] KLA1.100 1.070 1.140 0.930 0.910 0.980 0.800
Compactin1.180 1.140 1.070 1.140 1.040 0.980 1.080
KLA/Compactin1.110 1.100 1.180 1.020 0.990 0.780 0.680