Microarray analysis of RAW 264.7 cells treated with Kdo2-lipid A (KLA) and compactin (full time course)

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Kdo2-Lipid A / compactin gene array data - treatment:control ratios

KEGG pathway: Cysteine and methionine metabolism (mmu00270)

Legend:graph_icon: View data/graphs for replicates
Gene symbol    Time course plot Accession Description Treatment 30min 1hr 2hr 4hr 8hr 12hr 24hr
2410018C
20Rik
KLA  Compactin  Compactin+KLA
NM_026423 RIKEN cDNA 2410018C20 gene (2410018C20Rik), mRNA [NM_026423] KLA0.920 0.910 0.850 0.790 0.920 0.970 0.890
Compactin1.040 1.100 1.090 1.030 1.030 1.050 1.020
KLA/Compactin1.060 0.830 0.910 0.850 0.830 0.830 0.810
2410018C
20Rik
KLA  Compactin  Compactin+KLA
NM_026423 RIKEN cDNA 2410018C20 gene (2410018C20Rik), mRNA [NM_026423] KLA1.020 0.950 0.890 0.680 0.590 0.660 0.800
Compactin1.280 1.080 1.050 1.280 1.250 1.020 0.990
KLA/Compactin1.200 1.020 0.980 0.700 0.530 0.690 0.780
2410018C
20Rik
KLA  Compactin  Compactin+KLA
NM_026423 RIKEN cDNA 2410018C20 gene (2410018C20Rik), mRNA [NM_026423] KLA1.220 1.100 1.010 0.800 0.650 0.840 0.880
Compactin1.200 1.250 1.230 1.260 1.060 1.080 1.020
KLA/Compactin1.170 1.010 0.970 0.840 0.660 0.730 0.840
4930438A
08Rik
KLA  Compactin  Compactin+KLA
XM_001477470 gb|PREDICTED: Mus musculus RIKEN cDNA 4930438A08 gene (4930438A08Rik), mRNA [XM_001477470] KLA0.910 0.990 0.990 1.000 1.560 4.520 10.370
Compactin0.960 1.000 1.030 0.970 0.930 0.960 1.050
KLA/Compactin0.960 0.990 1.010 1.090 1.630 5.840 12.850
Adi1
KLA  Compactin  Compactin+KLA
NM_134052 acireductone dioxygenase 1 (Adi1), mRNA [NM_134052] KLA0.920 0.950 0.850 0.880 0.710 0.730 0.780
Compactin1.020 1.030 0.910 0.950 0.990 0.960 0.720
KLA/Compactin0.870 0.980 0.800 0.790 0.690 0.740 0.740
Ahcy
KLA  Compactin  Compactin+KLA
AK154302 NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630016H08 product:S-adenosylhomocysteine hydrolase, full insert sequence. [AK154302] KLA0.960 1.030 0.980 0.930 0.790 0.790 0.750
Compactin0.900 0.960 0.870 0.960 0.790 1.050 0.940
KLA/Compactin0.870 0.960 0.890 0.980 0.810 0.730 0.820
Ahcy
KLA  Compactin  Compactin+KLA
L32836 (clone C7/B9) S-adenosyl homocysteine hydrolase (ahcy) mRNA, complete cds. [L32836] KLA0.970 0.930 1.050 1.030 0.810 0.800 0.830
Compactin1.060 1.000 1.030 1.140 0.940 0.960 0.920
KLA/Compactin1.040 0.940 1.070 1.070 0.810 0.760 0.710
Ahcy
KLA  Compactin  Compactin+KLA
NM_016661 S-adenosylhomocysteine hydrolase (Ahcy), mRNA [NM_016661] KLA0.940 0.970 1.020 0.940 0.830 0.820 0.830
Compactin1.020 1.000 0.900 0.990 0.890 0.940 0.850
KLA/Compactin0.860 0.980 0.950 1.020 0.950 0.830 0.890
Ahcyl1
KLA  Compactin  Compactin+KLA
NM_145542 S-adenosylhomocysteine hydrolase-like 1 (Ahcyl1), mRNA [NM_145542] KLA0.970 1.100 1.260 1.210 1.150 1.250 2.360
Compactin0.980 0.940 0.940 1.090 0.970 0.880 0.790
KLA/Compactin0.980 1.040 1.140 1.320 1.190 1.510 2.080
Ahcyl1
KLA  Compactin  Compactin+KLA
NM_145542 S-adenosylhomocysteine hydrolase-like 1 (Ahcyl1), mRNA [NM_145542] KLA1.120 1.180 1.440 1.270 1.140 1.140 1.220
Compactin1.230 1.190 1.110 1.240 1.130 0.860 0.730
KLA/Compactin1.120 1.100 1.210 1.350 1.150 0.960 1.010
Ahcyl2
KLA  Compactin  Compactin+KLA
AB041551 brain cDNA, clone MNCb-5555. [AB041551] KLA0.930 1.010 1.180 0.940 1.030 1.010 0.910
Compactin0.990 1.010 0.990 0.960 1.030 1.000 1.050
KLA/Compactin0.950 0.940 1.130 0.980 0.990 1.010 0.870
Ahcyl2
KLA  Compactin  Compactin+KLA
NM_021414 S-adenosylhomocysteine hydrolase-like 2 (Ahcyl2), mRNA [NM_021414] KLA0.930 1.020 1.260 1.510 1.420 1.880 3.690
Compactin0.910 0.950 0.990 0.980 0.880 1.000 1.250
KLA/Compactin0.880 1.080 1.180 1.390 1.790 2.430 3.660
Ahcyl2
KLA  Compactin  Compactin+KLA
NM_021414 S-adenosylhomocysteine hydrolase-like 2 (Ahcyl2), mRNA [NM_021414] KLA0.980 0.960 0.940 1.190 0.990 1.000 1.380
Compactin0.940 1.010 0.910 0.990 0.990 0.970 0.990
KLA/Compactin0.980 1.030 0.960 1.230 1.230 1.390 1.830
Amd1
KLA  Compactin  Compactin+KLA
NM_009665 S-adenosylmethionine decarboxylase 1 (Amd1), mRNA [NM_009665] KLA0.910 0.970 0.960 0.880 0.710 0.710 0.890
Compactin0.960 0.890 0.900 0.930 0.880 0.930 0.850
KLA/Compactin0.840 1.000 0.940 0.710 0.810 0.660 0.820
Amd1
KLA  Compactin  Compactin+KLA
Z14986 gb|M.musculus mRNA encoding adenosylmethionine decarboxylase. [Z14986] KLA1.170 1.090 1.010 0.870 0.770 0.650 0.770
Compactin1.120 1.060 1.100 1.170 1.040 0.860 0.930
KLA/Compactin1.150 0.970 1.090 0.920 0.840 0.500 0.710
Apip
KLA  Compactin  Compactin+KLA
NM_019735 APAF1 interacting protein (Apip), mRNA [NM_019735] KLA0.970 1.040 1.010 1.010 0.700 0.680 0.910
Compactin1.080 1.010 1.060 1.010 0.950 0.870 0.800
KLA/Compactin0.940 1.010 1.020 1.020 0.870 0.760 0.870
Bhmt
KLA  Compactin  Compactin+KLA
74325340 betaine-homocysteine methyltransferase KLA1.070 0.990 0.940 1.030 0.980 0.990 0.980
Compactin1.000 1.030 1.030 1.050 0.970 1.050 1.060
KLA/Compactin1.000 0.990 0.980 0.950 0.980 0.940 1.040
Bhmt
KLA  Compactin  Compactin+KLA
NM_016668 betaine-homocysteine methyltransferase (Bhmt), mRNA [NM_016668] KLA0.980 0.960 0.990 0.980 0.980 1.010 1.050
Compactin0.950 1.010 0.980 0.950 0.960 0.930 1.030
KLA/Compactin1.210 0.980 1.000 1.030 1.000 1.010 1.070
Bhmt
KLA  Compactin  Compactin+KLA
NM_016668 betaine-homocysteine methyltransferase (Bhmt), mRNA [NM_016668] KLA1.020 1.010 0.980 1.040 1.070 1.040 1.100
Compactin0.930 1.000 0.960 0.980 0.930 0.980 0.970
KLA/Compactin0.980 0.940 0.900 1.000 1.030 1.020 1.060
Cbs
KLA  Compactin  Compactin+KLA
NM_144855 cystathionine beta-synthase (Cbs), transcript variant 1, mRNA [NM_144855] KLA1.070 1.010 0.990 1.050 0.970 0.970 0.940
Compactin0.970 1.040 0.930 0.960 1.000 1.070 0.950
KLA/Compactin0.990 1.000 0.980 0.960 1.000 1.000 1.020
Cdo1
KLA  Compactin  Compactin+KLA
NM_033037 cysteine dioxygenase 1, cytosolic (Cdo1), mRNA [NM_033037] KLA1.110 1.390 1.080 1.130 1.370 1.210 1.130
Compactin1.010 1.030 1.010 1.050 1.070 0.980 1.130
KLA/Compactin1.140 1.350 0.990 1.150 1.220 1.150 0.980
Cth
KLA  Compactin  Compactin+KLA
NM_145953 cystathionase (cystathionine gamma-lyase) (Cth), mRNA [NM_145953] KLA0.850 1.000 1.070 1.550 4.440 4.630 3.370
Compactin0.890 0.930 0.970 0.880 1.080 0.770 1.620
KLA/Compactin0.850 0.910 0.950 1.640 4.490 6.310 3.500
Cth
KLA  Compactin  Compactin+KLA
NM_145953 cystathionase (cystathionine gamma-lyase) (Cth), mRNA [NM_145953] KLA0.940 1.030 0.840 1.770 5.110 5.210 3.830
Compactin0.870 1.030 1.040 0.980 1.020 0.940 1.720
KLA/Compactin0.910 0.980 1.130 1.900 3.350 5.770 4.000
Dnmt1
KLA  Compactin  Compactin+KLA
NM_010066 DNA methyltransferase (cytosine-5) 1 (Dnmt1), mRNA [NM_010066] KLA1.340 1.180 1.120 0.720 0.490 0.510 0.640
Compactin1.450 1.090 1.250 1.230 0.980 0.990 0.670
KLA/Compactin1.260 1.150 1.050 0.810 0.520 0.440 0.570
Dnmt3a
KLA  Compactin  Compactin+KLA
NM_007872 DNA methyltransferase 3A (Dnmt3a), transcript variant 1, mRNA [NM_007872] KLA0.980 1.090 0.720 0.650 0.500 0.460 0.390
Compactin1.060 1.070 0.960 0.960 1.020 1.020 0.780
KLA/Compactin0.980 1.060 0.810 0.630 0.390 0.370 0.370
Dnmt3a
KLA  Compactin  Compactin+KLA
NM_007872 DNA methyltransferase 3A (Dnmt3a), transcript variant 1, mRNA [NM_007872] KLA1.080 0.990 1.120 0.730 0.550 0.530 0.370
Compactin1.150 1.180 1.080 1.210 0.920 0.910 0.640
KLA/Compactin1.120 1.070 1.070 0.640 0.520 0.450 0.320
Dnmt3a
KLA  Compactin  Compactin+KLA
NM_153743 DNA methyltransferase 3A (Dnmt3a), transcript variant 2, mRNA [NM_153743] KLA1.130 1.000 1.090 0.710 0.550 0.590 0.460
Compactin1.190 1.180 1.060 1.310 0.770 0.830 0.730
KLA/Compactin1.140 1.020 1.060 0.700 0.520 0.450 0.390
Dnmt3b
KLA  Compactin  Compactin+KLA
NM_001003961 DNA methyltransferase 3B (Dnmt3b), transcript variant 1, mRNA [NM_001003961] KLA1.090 0.980 1.060 1.090 0.870 0.810 0.670
Compactin1.100 1.090 1.050 1.070 0.930 0.950 0.950
KLA/Compactin0.990 1.040 1.100 1.070 0.820 0.710 0.640
Dnmt3l
KLA  Compactin  Compactin+KLA
NM_019448 DNA (cytosine-5-)-methyltransferase 3-like (Dnmt3l), transcript variant 1, mRNA [NM_019448] KLA1.090 1.020 1.380 1.830 2.190 2.150 1.780
Compactin1.020 0.970 1.070 0.960 1.040 1.080 1.630
KLA/Compactin1.030 1.040 1.490 1.970 2.510 2.730 1.910
Enoph1
KLA  Compactin  Compactin+KLA
NM_026421 enolase-phosphatase 1 (Enoph1), mRNA [NM_026421] KLA0.930 0.970 0.750 0.960 1.110 0.770 0.600
Compactin0.970 0.870 1.070 0.860 0.880 1.260 1.040
KLA/Compactin0.870 0.880 1.150 1.020 0.700 0.610 0.710
Enoph1
KLA  Compactin  Compactin+KLA
NM_026421 enolase-phosphatase 1 (Enoph1), mRNA [NM_026421] KLA1.280 1.260 1.260 1.240 1.070 0.910 0.810
Compactin1.410 1.250 1.180 1.270 1.100 1.020 0.880
KLA/Compactin1.180 1.090 1.270 1.180 1.060 0.750 0.930
Got1
KLA  Compactin  Compactin+KLA
NM_010324 glutamate oxaloacetate transaminase 1, soluble (Got1), mRNA [NM_010324] KLA0.990 0.960 0.820 0.740 0.780 1.140 1.350
Compactin1.110 1.060 1.070 1.250 0.950 0.700 0.640
KLA/Compactin1.020 1.050 0.850 0.770 0.760 1.070 1.070
Got2
KLA  Compactin  Compactin+KLA
NM_010325 glutamate oxaloacetate transaminase 2, mitochondrial (Got2), nuclear gene encoding mitochondrial protein, mRNA [NM_010325] KLA0.960 1.030 1.060 0.940 0.870 0.810 1.090
Compactin1.130 1.000 1.060 1.010 1.080 0.990 0.880
KLA/Compactin1.100 1.000 1.120 1.040 0.870 0.940 0.940
Il4i1
KLA  Compactin  Compactin+KLA
NM_010215 interleukin 4 induced 1 (Il4i1), mRNA [NM_010215] KLA1.160 1.780 6.000 7.610 4.240 1.830 0.970
Compactin1.000 1.090 1.000 1.040 0.830 0.820 1.690
KLA/Compactin1.260 2.060 5.680 8.020 5.700 2.690 1.220
Lao1
KLA  Compactin  Compactin+KLA
NM_133892 L-amino acid oxidase 1 (Lao1), mRNA [NM_133892] KLA1.040 0.950 0.920 1.020 0.930 1.010 0.920
Compactin1.030 0.990 1.130 1.010 1.060 1.010 0.960
KLA/Compactin0.970 0.930 0.980 1.050 0.970 1.030 0.970
Ldha
KLA  Compactin  Compactin+KLA
NM_010699 lactate dehydrogenase A (Ldha), mRNA [NM_010699] KLA0.860 1.040 0.690 0.970 1.170 0.830 0.750
Compactin0.790 1.100 1.010 1.020 1.160 1.110 0.970
KLA/Compactin0.870 1.020 0.830 0.960 0.850 0.830 1.070
Ldha
KLA  Compactin  Compactin+KLA
NM_010699 lactate dehydrogenase A (Ldha), mRNA [NM_010699] KLA1.090 0.980 0.830 0.930 1.150 0.840 0.700
Compactin0.980 1.090 0.960 0.890 1.100 1.290 0.930
KLA/Compactin0.880 0.990 0.930 0.960 0.760 0.790 1.070
Ldhal6b
KLA  Compactin  Compactin+KLA
NM_175349 lactate dehydrogenase A-like 6B (Ldhal6b), mRNA [NM_175349] KLA0.970 0.990 1.000 1.010 1.110 1.160 1.290
Compactin1.110 0.980 1.000 1.030 1.020 1.020 1.160
KLA/Compactin0.960 0.930 0.970 1.040 1.150 1.190 1.260
Ldhb
KLA  Compactin  Compactin+KLA
NM_008492 lactate dehydrogenase B (Ldhb), mRNA [NM_008492] KLA1.010 0.950 1.010 1.040 1.020 0.980 1.020
Compactin1.020 0.950 1.070 0.980 0.990 1.040 0.990
KLA/Compactin1.020 1.050 1.000 0.990 1.010 1.000 0.960
Ldhc
KLA  Compactin  Compactin+KLA
NM_013580 lactate dehydrogenase C (Ldhc), mRNA [NM_013580] KLA1.060 1.020 1.070 1.020 1.000 1.030 0.980
Compactin1.060 1.020 0.950 1.060 0.950 1.040 1.040
KLA/Compactin0.910 1.010 0.980 1.100 1.030 1.020 0.930
Mat1a
KLA  Compactin  Compactin+KLA
NM_133653 methionine adenosyltransferase I, alpha (Mat1a), mRNA [NM_133653] KLA1.030 0.970 1.020 1.020 1.030 0.940 1.010
Compactin1.020 1.010 1.040 0.990 1.080 0.960 1.010
KLA/Compactin1.000 1.000 0.970 0.990 0.950 0.970 0.960
Mat2a
KLA  Compactin  Compactin+KLA
NM_145569 methionine adenosyltransferase II, alpha (Mat2a), mRNA [NM_145569] KLA1.130 1.350 1.280 1.330 0.880 0.470 0.190
Compactin1.060 1.000 1.070 1.020 1.010 0.920 0.850
KLA/Compactin1.110 1.270 1.410 1.150 0.790 0.360 0.130
Mat2b
KLA  Compactin  Compactin+KLA
AK038303 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130094D24 product:similar to 5 of METHIONINE ADENOSYLTRANSFERASE REGULATORY BETA SUBUNIT (HYPOTHETICAL 37.6 KDA PROTEIN) [Homo sapiens], full insert sequence [AK0383 KLA0.950 0.910 0.980 0.940 0.940 1.020 1.040
Compactin1.080 1.070 1.050 1.020 1.050 1.000 1.040
KLA/Compactin0.930 0.980 1.000 0.910 0.960 1.040 0.870
Mat2b
KLA  Compactin  Compactin+KLA
NM_134017 methionine adenosyltransferase II, beta (Mat2b), mRNA [NM_134017] KLA0.810 0.810 0.860 0.880 0.810 0.980 1.150
Compactin0.900 0.860 1.010 1.100 1.030 1.000 0.910
KLA/Compactin0.880 0.810 0.840 0.770 0.920 1.010 0.950
Mat2b
KLA  Compactin  Compactin+KLA
NM_134017 methionine adenosyltransferase II, beta (Mat2b), mRNA [NM_134017] KLA1.030 0.930 0.910 0.810 0.810 0.860 0.640
Compactin1.140 1.080 1.140 1.150 0.870 0.980 0.970
KLA/Compactin1.030 0.880 0.860 0.890 0.810 0.750 0.590
Mpst
KLA  Compactin  Compactin+KLA
NM_138670 mercaptopyruvate sulfurtransferase (Mpst), nuclear gene encoding mitochondrial protein, mRNA [NM_138670] KLA0.980 0.990 0.940 0.850 0.730 0.750 1.020
Compactin0.820 0.880 1.010 0.990 0.950 0.820 0.910
KLA/Compactin0.950 0.900 0.880 0.800 0.830 0.760 1.120
Mtap
KLA  Compactin  Compactin+KLA
NM_024433 methylthioadenosine phosphorylase (Mtap), mRNA [NM_024433] KLA0.920 0.870 0.880 0.880 0.720 0.580 0.500
Compactin1.010 1.040 0.840 0.820 1.010 1.040 1.100
KLA/Compactin0.840 1.030 0.790 0.790 0.650 0.590 0.590
Mtr
KLA  Compactin  Compactin+KLA
AK037599 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130029B16 product:5-methyltetrahydrofolate-homocysteine methyltransferase, full insert sequence. [AK037599] KLA1.040 0.990 1.050 0.860 0.800 0.880 0.800
Compactin1.090 1.040 1.030 1.080 0.930 0.930 0.820
KLA/Compactin1.120 1.020 0.960 0.900 0.780 0.760 0.800
Mtr
KLA  Compactin  Compactin+KLA
NM_001081128 5-methyltetrahydrofolate-homocysteine methyltransferase (Mtr), mRNA [NM_001081128] KLA0.780 0.960 0.840 0.810 0.870 0.660 0.820
Compactin0.910 0.780 0.820 0.710 0.960 1.110 0.860
KLA/Compactin0.810 1.000 0.930 0.800 0.560 0.570 0.840
Mtr
KLA  Compactin  Compactin+KLA
NM_001081128 5-methyltetrahydrofolate-homocysteine methyltransferase (Mtr), mRNA [NM_001081128] KLA0.850 0.990 0.840 0.930 0.920 0.660 0.700
Compactin0.930 0.910 0.890 0.770 0.980 1.120 0.760
KLA/Compactin1.010 1.060 0.960 0.790 0.640 0.620 0.820
Sds
KLA  Compactin  Compactin+KLA
NM_145565 serine dehydratase (Sds), mRNA [NM_145565] KLA1.000 1.040 0.980 0.960 1.000 1.010 1.050
Compactin1.010 1.040 1.020 0.980 1.030 1.000 1.010
KLA/Compactin0.990 0.990 1.010 0.960 0.980 0.970 0.940
Sms
KLA  Compactin  Compactin+KLA
NM_009214 spermine synthase (Sms), mRNA [NM_009214] KLA0.870 0.830 0.730 0.900 1.040 0.820 0.750
Compactin0.800 0.920 0.980 0.780 0.940 1.100 0.930
KLA/Compactin0.840 0.820 1.000 0.840 0.770 0.770 0.880
Sms
KLA  Compactin  Compactin+KLA
NM_009214 spermine synthase (Sms), mRNA [NM_009214] KLA1.020 1.030 1.160 1.130 0.970 0.940 0.650
Compactin1.060 1.050 1.040 0.990 0.900 0.890 0.930
KLA/Compactin0.980 0.930 1.240 1.040 0.970 0.800 0.680
Sms
KLA  Compactin  Compactin+KLA
NM_009214 spermine synthase (Sms), mRNA [NM_009214] KLA1.110 1.000 1.140 1.220 0.980 0.890 0.640
Compactin1.040 1.050 1.080 1.040 1.000 0.930 0.970
KLA/Compactin1.070 1.030 1.130 1.130 0.960 0.820 0.650
Srm
KLA  Compactin  Compactin+KLA
NM_009272 spermidine synthase (Srm), mRNA [NM_009272] KLA1.070 1.040 1.000 0.840 0.800 0.650 0.540
Compactin0.970 1.060 0.920 1.030 0.870 1.050 1.010
KLA/Compactin0.930 1.070 0.880 0.820 0.640 0.440 0.430
Tat
KLA  Compactin  Compactin+KLA
NM_146214 tyrosine aminotransferase (Tat), nuclear gene encoding mitochondrial protein, mRNA [NM_146214] KLA1.110 0.960 1.040 1.030 1.040 1.020 1.050
Compactin0.940 0.890 1.010 1.030 1.040 1.080 0.980
KLA/Compactin0.980 1.030 1.080 1.070 1.030 1.130 1.110
Tst
KLA  Compactin  Compactin+KLA
NM_009437 thiosulfate sulfurtransferase, mitochondrial (Tst), nuclear gene encoding mitochondrial protein, mRNA [NM_009437] KLA0.980 0.940 0.890 0.880 0.870 0.780 0.780
Compactin1.020 1.000 1.020 1.050 0.980 0.900 0.780
KLA/Compactin1.000 1.000 0.930 0.940 0.860 0.730 0.750