Structure database (LMSD)Return to Databases Overview
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| LM ID | LMGP01012203 | |||||||||||||||||||||||||||
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| Common Name | PC(20:3(5Z,8Z,11Z)/20:1(11Z)) | |||||||||||||||||||||||||||
| Systematic Name | 1-(5Z,8Z,11Z-eicosatrienoyl)-2-(11Z-eicosenoyl)-sn-glycero-3-phosphocholine | |||||||||||||||||||||||||||
| Synonyms | PC(40:4); PC(20:1_20:3) | |||||||||||||||||||||||||||
| Exact Mass | ||||||||||||||||||||||||||||
| Formula | C48H88NO8P | |||||||||||||||||||||||||||
| Category | Glycerophospholipids [GP] | |||||||||||||||||||||||||||
| Main Class | Glycerophosphocholines [GP01] | |||||||||||||||||||||||||||
| Sub Class | Diacylglycerophosphocholines [GP0101] | |||||||||||||||||||||||||||
| Abbrev | PC 40:4 | |||||||||||||||||||||||||||
| Abbrev Chains | PC 20:1_20:3 | |||||||||||||||||||||||||||
| PubChem CID | 53478969 | |||||||||||||||||||||||||||
| HMDB ID | HMDB0008374 | |||||||||||||||||||||||||||
| YMDB ID | YMDB02098 | |||||||||||||||||||||||||||
| InChIKey | LUPUCKHJOGTAAZ-VXKXFZBGSA-N Show lipids differing only in stereochemistry/bond geometry | |||||||||||||||||||||||||||
| InChI |
InChI=1S/C48H88NO8P/c1-6-8-10-12-14-16-18-20-22-24-26-28-30-32-34-36-38-40-47(50)54-44-46(45-56-58(52,53)55-43-42-49(3,4)5)57-48(51)41-39-37-35-33-31-29-27-25-23-21-19-17-15-13-11-9-7-2/h20-23,26,28,32,34,46H,6-19,24-25,27,29-31,33,35-45H2,1-5H3/b22-20-,23-21-,28-26-,34-32-/t46-/m1/s1
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| SMILES |
[C@](COP(=O)([O-])OCC[N+](C)(C)C)([H])(OC(CCCCCCCCC/C=C\CCCCCCCC)=O)COC(CCC/C=C\C/C=C\C/C=C\CCCCCCCC)=O
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| Status | Active | |||||||||||||||||||||||||||
| Comments | Yeast Metabolome Database (http://www.ymdb.ca) | |||||||||||||||||||||||||||
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LIPID MAPS® abbreviations for glycerophospholipids (GP) The LIPID MAPS® glycerophospholipid abbreviations (PC, PE, etc.) are used here to refer to species with one or two radyl side-chains where the structures of the side chains are indicated within parentheses in the 'Headgroup(sn1/sn2)' format (e.g. PC(16:0/18:1(9Z)). By default, R stereochemistry at the C-2 carbon of glycerol and attachment of the headgroup at the sn3 position is assumed. Also, acyl chains are assumed by default. The 'O-' prefix is used to indicate the presence of an alkyl ether substituent e.g. PC(O-16:0/18:1(9Z)), whereas the 'P-' prefix is used for the 1Z-alkenyl ether (Plasmalogen) substituent e.g. PC(P-16:0/18:1(9Z)). For molecules with opposite (S) stereochemistry at C2 of the glycerol group and attachment of the headgroup at the sn1 position, the stereochemistry specification of [S] is appended to the abbreviation. The 'Headgroup(sn3/sn2)' abbreviation format is used. For molecules with unknown stereochemistry at the C-2 carbon of the glycerol group, the stereochemistry specification of [U] is appended to the abbreviation and the structure is drawn with C-2 stereochemistry unspecified. |
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