Structure Database (LMSD)
Common Name
Cer(d18:1/26:0)
Systematic Name
N-(hexacosanoyl)-sphing-4-enine
Synonyms
- C26 Cer
- N-(hexacosanoyl)-ceramide
- N-(hexacosanoyl)-ceramide
- Cer[NS]
LM ID
LMSP02010011
Formula
Exact Mass
Calculate m/z
677.668595
Sum Composition
Abbrev Chains
Cer 18:1;O2/26:0
Status
Curated
3D model of Cer(d18:1/26:0)
Please note: Where there are chiral atoms but the stereochemistry is undefined, the 3D model takes an arbitrary conformation
Classification
Category
Main Class
Sub Class
Biological Context
C26 Ceramide is an endogenous ceramide.1 C26 Ceramide levels are increased in tumor tissues from patients with hepatocellular carcinoma (HCC) compared to normal liver tissues.2 C26 ceramide levels are also increased in acid ceramidase deficiency, a lysosomal disorder characterized by developmental delay, myoclonic seizures, and hematological abnormalities.3 This product is fully synthetic and has no variations in the fatty acyl chain or sphingoid backbone.
This information has been provided by Cayman Chemical
References
Reactions
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Reactions are shown if the E.C. number of the enzyme catalysing it is annotated in the UniProt database for a species belonging to the selected taxonomic class.
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References
Taxonomy Information
Curated from
NCBI taxonomy class
Reference
Homo sapiens
(#9606)
Mammalia
(#40674)
Lipidomics reveals a remarkable diversity of lipids in human plasma,
J Lipid Res, 2010
J Lipid Res, 2010
Pubmed ID:
20671299
DOI:
10.1194/jlr.M009449
Mus musculus
(#10090)
Mammalia
(#40674)
Subcellular organelle lipidomics in TLR-4-activated macrophages.,
J Lipid Res, 2010
J Lipid Res, 2010
Pubmed ID:
20574076
DOI:
10.1194/jlr.M008748
String Representations
InChiKey (Click to copy)
CJROVRTUSFQVMR-GVOPMEMSSA-N
InChi (Click to copy)
InChI=1S/C44H87NO3/c1-3-5-7-9-11-13-15-17-18-19-20-21-22-23-24-25-26-28-30-32-34-36-38-40-44(48)45-42(41-46)43(47)39-37-35-33-31-29-27-16-14-12-10-8-6-4-2/h37,39,42-43,46-47H,3-36,38,40-41H2,1-2H3,(H,45,48)/b39-37+/t42-,43+/m0/s1
SMILES (Click to copy)
[C@](CO)([H])(NC(CCCCCCCCCCCCCCCCCCCCCCCCC)=O)[C@]([H])(O)/C=C/CCCCCCCCCCCCC
Other Databases
Calculated Physicochemical Properties
Heavy Atoms
48
Rings
0
Aromatic Rings
0
Rotatable Bonds
40
Van der Waals Molecular Volume
801.85
Topological Polar Surface Area
69.56
Hydrogen Bond Donors
3
Hydrogen Bond Acceptors
3
logP
14.32
Molar Refractivity
213.24
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Updated at
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