Microarray analysis of RAW 264.7 cells treated with Kdo2-lipid A (KLA) and compactin (full time course)

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Kdo2-Lipid A / compactin gene array data - treatment:control ratios

KEGG pathway: Glycosphingolipid biosynthesis - lacto and neolacto series (mmu00601)

Legend:graph_icon: View data/graphs for replicates
Gene symbol    Time course plot Accession Description Treatment 30min 1hr 2hr 4hr 8hr 12hr 24hr
Abo
KLA  Compactin  Compactin+KLA
NM_030718 ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase) (Abo), mRNA [NM_030718] KLA0.930 0.980 0.950 0.990 1.020 0.930 0.890
Compactin1.070 0.960 1.040 0.980 1.050 0.980 0.960
KLA/Compactin1.000 0.990 1.070 1.110 0.970 1.000 1.000
B3galt1
KLA  Compactin  Compactin+KLA
NM_020283 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 (B3galt1), mRNA [NM_020283] KLA1.020 0.960 0.980 0.930 1.070 1.060 1.030
Compactin0.960 0.960 1.030 0.950 0.990 0.940 1.110
KLA/Compactin0.990 0.990 0.990 0.990 1.030 0.990 0.990
B3galt1
KLA  Compactin  Compactin+KLA
NM_020283 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1 (B3galt1), mRNA [NM_020283] KLA1.030 0.990 0.910 0.970 0.960 0.990 1.290
Compactin1.050 0.960 1.020 0.970 1.050 1.010 0.960
KLA/Compactin0.920 0.950 1.030 0.990 0.950 1.050 1.030
B3galt2
KLA  Compactin  Compactin+KLA
NM_020025 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 (B3galt2), mRNA [NM_020025] KLA0.910 1.020 1.050 0.970 0.970 1.000 1.020
Compactin1.000 1.010 1.020 0.990 1.080 1.050 1.040
KLA/Compactin1.030 1.040 0.970 1.070 1.070 1.040 0.990
B3galt2
KLA  Compactin  Compactin+KLA
NM_020025 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 (B3galt2), mRNA [NM_020025] KLA1.020 1.030 1.030 1.000 0.990 0.960 0.990
Compactin0.980 1.040 0.980 0.970 1.090 1.010 0.960
KLA/Compactin1.030 1.010 1.050 1.080 0.970 0.990 1.010
B3galt5
KLA  Compactin  Compactin+KLA
NM_033149 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 (B3galt5), transcript variant 1, mRNA [NM_033149] KLA1.000 0.930 1.030 0.990 0.950 1.000 1.180
Compactin1.050 0.980 1.000 0.960 1.020 1.000 1.040
KLA/Compactin1.010 1.010 1.020 1.030 1.020 0.990 0.960
B3gnt1
KLA  Compactin  Compactin+KLA
NM_175383 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 1 (B3gnt1), mRNA [NM_175383] KLA1.060 0.930 0.850 0.530 0.420 0.570 0.620
Compactin1.000 0.930 0.980 0.980 1.000 0.930 0.820
KLA/Compactin1.090 0.910 0.830 0.490 0.500 0.680 0.550
B3gnt2
KLA  Compactin  Compactin+KLA
NM_016888 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), mRNA [NM_016888] KLA0.920 0.970 1.120 2.620 1.840 1.380 1.270
Compactin0.940 0.880 0.910 0.990 1.050 1.300 1.250
KLA/Compactin1.010 1.020 1.110 2.550 2.060 1.960 1.280
B3gnt2
KLA  Compactin  Compactin+KLA
NM_016888 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (B3gnt2), mRNA [NM_016888] KLA0.960 0.950 1.060 2.960 1.830 1.880 1.580
Compactin0.960 0.920 1.040 1.030 1.370 1.490 1.280
KLA/Compactin0.950 0.970 1.060 2.680 2.710 1.560 1.300
B3gnt3
KLA  Compactin  Compactin+KLA
NM_028189 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 (B3gnt3), mRNA [NM_028189] KLA0.910 0.980 0.920 0.980 1.110 1.130 1.200
Compactin0.950 0.940 0.980 0.920 0.940 1.090 1.110
KLA/Compactin0.890 0.870 0.970 1.030 1.050 1.470 1.610
B3gnt4
KLA  Compactin  Compactin+KLA
NM_198611 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 (B3gnt4), mRNA [NM_198611] KLA0.950 0.980 0.990 0.960 1.060 1.050 1.070
Compactin1.000 0.970 0.940 1.000 0.990 0.970 1.070
KLA/Compactin1.040 0.950 1.050 1.040 1.010 0.970 1.050
B3gnt4
KLA  Compactin  Compactin+KLA
NM_198611 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 (B3gnt4), mRNA [NM_198611] KLA1.020 1.000 1.010 1.020 0.980 0.970 0.970
Compactin1.030 1.080 1.030 1.000 1.100 1.030 1.020
KLA/Compactin0.990 0.960 1.080 1.050 1.000 1.040 1.020
B3gnt5
KLA  Compactin  Compactin+KLA
NM_054052 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 (B3gnt5), mRNA [NM_054052] KLA1.010 0.960 1.040 1.070 1.000 0.990 1.030
Compactin1.050 1.020 0.980 1.020 0.960 0.970 0.920
KLA/Compactin1.030 1.050 1.040 0.980 1.020 0.950 1.000
B3gnt5
KLA  Compactin  Compactin+KLA
NM_054052 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 (B3gnt5), mRNA [NM_054052] KLA1.020 1.010 1.020 0.950 1.000 1.030 0.990
Compactin1.000 1.050 0.990 0.990 1.060 1.080 1.050
KLA/Compactin0.960 1.030 0.970 0.990 0.990 0.990 1.030
B4galt1
KLA  Compactin  Compactin+KLA
NM_022305 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (B4galt1), mRNA [NM_022305] KLA0.870 0.850 0.650 0.510 0.750 0.750 0.770
Compactin0.810 0.910 0.960 0.870 1.110 1.040 0.900
KLA/Compactin0.970 0.790 0.820 0.470 0.740 0.800 0.880
B4galt1
KLA  Compactin  Compactin+KLA
NM_022305 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (B4galt1), mRNA [NM_022305] KLA0.890 0.790 0.820 0.480 0.930 0.680 0.920
Compactin0.970 0.920 0.810 0.850 1.400 1.020 0.880
KLA/Compactin0.940 0.840 0.620 0.450 0.760 1.040 1.200
B4galt1
KLA  Compactin  Compactin+KLA
NM_022305 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (B4galt1), mRNA [NM_022305] KLA1.000 1.100 1.030 0.990 1.030 1.140 1.240
Compactin0.970 0.950 0.990 0.980 0.990 1.040 1.050
KLA/Compactin0.900 1.060 0.950 1.060 0.980 1.070 1.210
B4galt2
KLA  Compactin  Compactin+KLA
NM_017377 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (B4galt2), mRNA [NM_017377] KLA0.880 0.920 1.020 1.070 1.010 1.210 0.930
Compactin0.990 1.110 0.970 1.010 1.000 0.940 0.960
KLA/Compactin0.930 1.020 1.000 0.990 1.030 1.040 1.020
B4galt2
KLA  Compactin  Compactin+KLA
NM_017377 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (B4galt2), mRNA [NM_017377] KLA1.010 1.050 0.990 1.030 0.960 1.000 0.950
Compactin0.910 1.020 0.960 0.960 0.980 1.030 0.900
KLA/Compactin0.930 1.170 1.010 0.970 0.970 1.010 0.970
B4galt3
KLA  Compactin  Compactin+KLA
BC021830 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3, mRNA (cDNA clone IMAGE:3978260), **** WARNING: chimeric clone ****. [BC021830] KLA0.980 0.990 0.990 1.050 0.920 1.030 0.890
Compactin0.980 1.030 0.960 0.980 0.940 0.970 0.970
KLA/Compactin1.010 0.980 0.980 0.970 1.020 1.020 0.870
B4galt3
KLA  Compactin  Compactin+KLA
NM_020579 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 (B4galt3), mRNA [NM_020579] KLA0.960 1.130 0.970 1.800 2.120 2.070 2.060
Compactin1.070 0.950 0.900 0.980 0.930 0.960 1.200
KLA/Compactin1.040 1.060 0.900 1.980 2.290 2.310 2.190
B4galt4
KLA  Compactin  Compactin+KLA
NM_019804 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4 (B4galt4), mRNA [NM_019804] KLA1.030 0.960 1.060 1.020 0.990 0.990 0.970
Compactin1.010 1.060 1.040 0.960 0.980 1.070 1.020
KLA/Compactin0.970 0.950 1.000 1.020 1.060 0.990 1.090
Fut1
KLA  Compactin  Compactin+KLA
NM_008051 fucosyltransferase 1 (Fut1), mRNA [NM_008051] KLA1.010 0.960 0.960 1.020 0.960 0.960 0.940
Compactin0.980 1.010 0.970 1.020 0.980 1.030 1.000
KLA/Compactin1.020 0.980 1.000 0.970 0.920 0.920 1.000
Fut2
KLA  Compactin  Compactin+KLA
NM_018876 fucosyltransferase 2 (Fut2), mRNA [NM_018876] KLA1.040 1.000 0.980 1.020 0.940 0.950 0.920
Compactin0.920 0.960 1.000 0.970 0.980 1.030 1.030
KLA/Compactin0.940 0.980 1.010 0.970 0.900 0.900 1.040
Fut2
KLA  Compactin  Compactin+KLA
NM_018876 fucosyltransferase 2 (Fut2), mRNA [NM_018876] KLA1.060 0.990 0.980 1.040 1.060 1.000 1.000
Compactin0.950 1.030 0.960 0.950 1.030 0.970 0.900
KLA/Compactin1.040 0.960 0.950 0.980 1.020 1.010 1.010
Fut4
KLA  Compactin  Compactin+KLA
NM_010242 fucosyltransferase 4 (Fut4), mRNA [NM_010242] KLA0.930 0.920 0.940 1.200 1.020 0.850 0.640
Compactin0.970 1.080 0.980 1.100 1.020 0.980 1.070
KLA/Compactin0.980 0.920 0.960 1.100 1.100 0.860 0.640
Fut7
KLA  Compactin  Compactin+KLA
NM_013524 fucosyltransferase 7 (Fut7), mRNA [NM_013524] KLA0.880 0.840 0.850 0.770 0.790 0.870 0.670
Compactin0.930 1.000 1.010 1.040 1.320 1.640 2.460
KLA/Compactin0.870 0.850 0.790 0.800 1.160 1.190 0.740
Fut9
KLA  Compactin  Compactin+KLA
NM_010243 fucosyltransferase 9 (Fut9), mRNA [NM_010243] KLA0.960 1.010 0.990 1.000 1.010 0.980 1.000
Compactin1.100 1.030 1.050 1.000 0.990 0.990 1.020
KLA/Compactin1.040 0.990 0.990 1.030 0.990 0.930 1.030
Fut9
KLA  Compactin  Compactin+KLA
NM_010243 fucosyltransferase 9 (Fut9), mRNA [NM_010243] KLA1.000 0.990 1.000 0.970 1.050 1.040 0.980
Compactin1.000 1.060 1.000 1.020 0.930 1.000 1.060
KLA/Compactin1.010 0.930 0.940 1.020 0.950 0.930 0.910
Fut9
KLA  Compactin  Compactin+KLA
NM_010243 fucosyltransferase 9 (Fut9), mRNA [NM_010243] KLA1.000 1.050 1.190 0.990 0.960 0.950 0.980
Compactin1.000 1.000 0.980 1.010 0.980 0.980 1.020
KLA/Compactin1.020 0.970 1.020 0.990 0.970 0.980 0.970
Gcnt2
KLA  Compactin  Compactin+KLA
NM_133219 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (Gcnt2), transcript variant 3, mRNA [NM_133219] KLA1.020 1.000 1.010 1.010 0.970 0.950 1.070
Compactin1.040 1.030 1.050 1.000 1.000 1.050 0.980
KLA/Compactin1.000 1.010 0.970 1.020 1.020 1.030 1.010
Gcnt2
KLA  Compactin  Compactin+KLA
NM_133219 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (Gcnt2), transcript variant 3, mRNA [NM_133219] KLA1.030 1.030 1.040 1.050 1.080 1.030 0.950
Compactin0.980 0.950 1.000 0.950 1.040 0.960 1.030
KLA/Compactin1.040 1.040 0.990 1.080 1.000 1.020 0.980
Ggta1
KLA  Compactin  Compactin+KLA
NM_010283 glycoprotein galactosyltransferase alpha 1, 3 (Ggta1), mRNA [NM_010283] KLA1.080 1.050 1.140 1.140 3.160 2.920 2.850
Compactin1.050 0.930 1.090 1.000 1.030 1.060 1.250
KLA/Compactin1.220 0.890 1.050 1.140 3.260 2.990 2.970
Sec1
KLA  Compactin  Compactin+KLA
NM_019934 secretory blood group 1 (Sec1), mRNA [NM_019934] KLA0.970 1.080 0.940 0.970 0.910 0.990 0.980
Compactin1.070 1.020 1.000 1.030 1.050 1.100 1.060
KLA/Compactin0.950 1.030 1.030 1.040 0.980 0.920 0.970
Sec1
KLA  Compactin  Compactin+KLA
NM_019934 secretory blood group 1 (Sec1), mRNA [NM_019934] KLA0.990 0.980 1.010 0.990 0.930 0.950 0.950
Compactin1.050 0.950 1.000 1.040 0.940 0.990 1.030
KLA/Compactin1.000 0.970 0.970 0.940 1.510 0.860 0.890
St3gal3
KLA  Compactin  Compactin+KLA
NM_009176 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (St3gal3), mRNA [NM_009176] KLA0.920 0.880 1.000 1.200 1.010 0.970 1.280
Compactin0.960 0.930 0.980 1.060 0.960 1.100 0.980
KLA/Compactin1.000 0.930 0.940 1.260 1.080 1.110 1.210
St3gal3
KLA  Compactin  Compactin+KLA
NM_009176 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (St3gal3), mRNA [NM_009176] KLA1.090 1.180 1.100 1.640 0.990 0.990 1.020
Compactin1.070 1.150 1.010 1.060 1.000 0.880 0.900
KLA/Compactin1.070 1.170 1.080 1.680 1.000 0.870 1.050
St3gal4
KLA  Compactin  Compactin+KLA
NM_009178 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 (St3gal4), mRNA [NM_009178] KLA0.930 1.000 0.970 1.400 1.870 1.900 2.390
Compactin1.040 0.990 1.040 1.010 0.870 1.010 1.100
KLA/Compactin0.980 0.990 1.100 1.490 2.160 2.570 3.180
St3gal4
KLA  Compactin  Compactin+KLA
NM_009178 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 (St3gal4), mRNA [NM_009178] KLA0.940 0.970 1.000 1.480 1.820 2.040 2.210
Compactin0.960 0.970 1.090 0.990 0.870 1.000 1.170
KLA/Compactin0.990 0.920 1.100 1.590 2.000 2.540 2.770
St3gal6
KLA  Compactin  Compactin+KLA
NM_018784 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 (St3gal6), mRNA [NM_018784] KLA1.020 1.150 1.070 1.210 1.170 1.480 2.960
Compactin0.900 1.200 0.960 1.040 1.140 1.630 3.550
KLA/Compactin0.990 1.050 0.970 1.330 1.440 1.940 3.700
St3gal6
KLA  Compactin  Compactin+KLA
NM_018784 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 (St3gal6), mRNA [NM_018784] KLA1.400 1.220 1.370 1.330 1.370 1.530 2.760
Compactin1.160 1.100 1.250 1.160 1.120 1.640 3.300
KLA/Compactin1.230 0.990 1.170 1.550 1.700 2.020 3.460
St8sia1
KLA  Compactin  Compactin+KLA
NM_011374 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 (St8sia1), mRNA [NM_011374] KLA1.040 1.000 1.000 1.000 0.950 1.080 1.020
Compactin0.960 1.030 1.030 0.990 1.030 1.090 1.070
KLA/Compactin0.990 0.980 0.930 1.000 1.040 0.990 1.060
St8sia1
KLA  Compactin  Compactin+KLA
NM_011374 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 (St8sia1), mRNA [NM_011374] KLA1.100 1.090 1.020 1.100 0.840 0.850 0.800
Compactin1.180 0.970 1.060 1.150 1.170 1.190 1.110
KLA/Compactin1.060 1.010 1.040 1.120 0.930 0.820 0.830