Microarray analysis of RAW 264.7 cells treated with Kdo2-lipid A (KLA) and compactin (full time course)

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Kdo2-Lipid A / compactin gene array data - treatment:control ratios

KEGG pathway: Other types of O-glycan biosynthesis (mmu00514)

Legend:graph_icon: View data/graphs for replicates
Gene symbol    Time course plot Accession Description Treatment 30min 1hr 2hr 4hr 8hr 12hr 24hr
AK086752
KLA  Compactin  Compactin+KLA
AK086752 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930049G22 product:hypothetical protein, full insert sequence. [AK086752] KLA0.980 1.020 0.940 0.980 0.930 1.020 0.940
Compactin1.050 1.060 1.020 1.000 1.040 1.020 1.010
KLA/Compactin0.980 1.030 1.040 0.990 1.070 0.990 1.060
B3galt4
KLA  Compactin  Compactin+KLA
NM_019420 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4 (B3galt4), mRNA [NM_019420] KLA0.940 0.840 0.860 0.870 0.900 1.020 1.150
Compactin1.000 1.040 1.010 1.070 1.090 1.120 1.130
KLA/Compactin1.040 0.870 0.850 0.900 0.980 1.250 1.000
B3gat1
KLA  Compactin  Compactin+KLA
NM_029792 beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) (B3gat1), mRNA [NM_029792] KLA0.920 0.990 1.060 1.040 1.020 1.000 1.000
Compactin0.960 1.010 0.990 1.040 0.990 1.030 1.050
KLA/Compactin0.980 1.090 1.010 1.000 1.030 0.990 1.110
B3gat1
KLA  Compactin  Compactin+KLA
NM_029792 beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) (B3gat1), mRNA [NM_029792] KLA1.000 1.000 0.940 1.000 0.980 1.070 1.060
Compactin0.990 0.980 1.020 1.010 0.920 1.010 1.040
KLA/Compactin1.080 0.940 1.020 0.970 1.000 0.940 1.080
B3gat2
KLA  Compactin  Compactin+KLA
NM_172124 beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S) (B3gat2), mRNA [NM_172124] KLA1.030 1.060 0.960 1.070 1.000 0.960 1.000
Compactin1.090 1.010 0.990 1.020 0.950 0.960 1.650
KLA/Compactin0.960 1.040 1.020 1.100 0.920 1.010 1.070
B4galt1
KLA  Compactin  Compactin+KLA
NM_022305 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (B4galt1), mRNA [NM_022305] KLA0.870 0.850 0.650 0.510 0.750 0.750 0.770
Compactin0.810 0.910 0.960 0.870 1.110 1.040 0.900
KLA/Compactin0.970 0.790 0.820 0.470 0.740 0.800 0.880
B4galt1
KLA  Compactin  Compactin+KLA
NM_022305 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (B4galt1), mRNA [NM_022305] KLA0.890 0.790 0.820 0.480 0.930 0.680 0.920
Compactin0.970 0.920 0.810 0.850 1.400 1.020 0.880
KLA/Compactin0.940 0.840 0.620 0.450 0.760 1.040 1.200
B4galt1
KLA  Compactin  Compactin+KLA
NM_022305 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 1 (B4galt1), mRNA [NM_022305] KLA1.000 1.100 1.030 0.990 1.030 1.140 1.240
Compactin0.970 0.950 0.990 0.980 0.990 1.040 1.050
KLA/Compactin0.900 1.060 0.950 1.060 0.980 1.070 1.210
B4galt2
KLA  Compactin  Compactin+KLA
NM_017377 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (B4galt2), mRNA [NM_017377] KLA0.880 0.920 1.020 1.070 1.010 1.210 0.930
Compactin0.990 1.110 0.970 1.010 1.000 0.940 0.960
KLA/Compactin0.930 1.020 1.000 0.990 1.030 1.040 1.020
B4galt2
KLA  Compactin  Compactin+KLA
NM_017377 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 (B4galt2), mRNA [NM_017377] KLA1.010 1.050 0.990 1.030 0.960 1.000 0.950
Compactin0.910 1.020 0.960 0.960 0.980 1.030 0.900
KLA/Compactin0.930 1.170 1.010 0.970 0.970 1.010 0.970
B4galt3
KLA  Compactin  Compactin+KLA
BC021830 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3, mRNA (cDNA clone IMAGE:3978260), **** WARNING: chimeric clone ****. [BC021830] KLA0.980 0.990 0.990 1.050 0.920 1.030 0.890
Compactin0.980 1.030 0.960 0.980 0.940 0.970 0.970
KLA/Compactin1.010 0.980 0.980 0.970 1.020 1.020 0.870
B4galt3
KLA  Compactin  Compactin+KLA
NM_020579 UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 3 (B4galt3), mRNA [NM_020579] KLA0.960 1.130 0.970 1.800 2.120 2.070 2.060
Compactin1.070 0.950 0.900 0.980 0.930 0.960 1.200
KLA/Compactin1.040 1.060 0.900 1.980 2.290 2.310 2.190
Chst10
KLA  Compactin  Compactin+KLA
NM_145142 carbohydrate sulfotransferase 10 (Chst10), mRNA [NM_145142] KLA0.990 1.120 0.800 0.440 0.360 0.340 0.190
Compactin0.890 1.020 0.850 0.850 0.920 0.820 0.390
KLA/Compactin0.770 0.940 0.910 0.520 0.210 0.220 0.180
Fut4
KLA  Compactin  Compactin+KLA
NM_010242 fucosyltransferase 4 (Fut4), mRNA [NM_010242] KLA0.930 0.920 0.940 1.200 1.020 0.850 0.640
Compactin0.970 1.080 0.980 1.100 1.020 0.980 1.070
KLA/Compactin0.980 0.920 0.960 1.100 1.100 0.860 0.640
Fut7
KLA  Compactin  Compactin+KLA
NM_013524 fucosyltransferase 7 (Fut7), mRNA [NM_013524] KLA0.880 0.840 0.850 0.770 0.790 0.870 0.670
Compactin0.930 1.000 1.010 1.040 1.320 1.640 2.460
KLA/Compactin0.870 0.850 0.790 0.800 1.160 1.190 0.740
Fut9
KLA  Compactin  Compactin+KLA
NM_010243 fucosyltransferase 9 (Fut9), mRNA [NM_010243] KLA0.960 1.010 0.990 1.000 1.010 0.980 1.000
Compactin1.100 1.030 1.050 1.000 0.990 0.990 1.020
KLA/Compactin1.040 0.990 0.990 1.030 0.990 0.930 1.030
Fut9
KLA  Compactin  Compactin+KLA
NM_010243 fucosyltransferase 9 (Fut9), mRNA [NM_010243] KLA1.000 0.990 1.000 0.970 1.050 1.040 0.980
Compactin1.000 1.060 1.000 1.020 0.930 1.000 1.060
KLA/Compactin1.010 0.930 0.940 1.020 0.950 0.930 0.910
Fut9
KLA  Compactin  Compactin+KLA
NM_010243 fucosyltransferase 9 (Fut9), mRNA [NM_010243] KLA1.000 1.050 1.190 0.990 0.960 0.950 0.980
Compactin1.000 1.000 0.980 1.010 0.980 0.980 1.020
KLA/Compactin1.020 0.970 1.020 0.990 0.970 0.980 0.970
Glt25d1
KLA  Compactin  Compactin+KLA
NM_146211 glycosyltransferase 25 domain containing 1 (Glt25d1), mRNA [NM_146211] KLA1.130 1.000 0.910 0.780 0.530 0.630 0.700
Compactin1.110 1.030 1.050 1.090 0.880 0.960 0.810
KLA/Compactin1.080 1.000 0.950 0.660 0.510 0.640 0.670
Glt25d2
KLA  Compactin  Compactin+KLA
NM_177756 glycosyltransferase 25 domain containing 2 (Glt25d2), mRNA [NM_177756] KLA0.960 0.960 1.030 1.040 1.030 1.040 1.100
Compactin0.980 0.990 0.960 1.000 1.030 0.990 1.010
KLA/Compactin0.950 1.020 0.950 1.030 0.990 1.040 0.970
Glt25d2
KLA  Compactin  Compactin+KLA
NM_177756 glycosyltransferase 25 domain containing 2 (Glt25d2), mRNA [NM_177756] KLA0.990 1.040 0.990 1.100 1.070 1.020 0.990
Compactin1.010 1.020 1.010 0.980 1.000 1.020 0.910
KLA/Compactin1.350 1.020 0.980 1.120 0.980 0.990 1.030
Glt8d3
KLA  Compactin  Compactin+KLA
158508451 glycosyltransferase 8 domain containing 3 KLA1.040 0.770 0.630 0.650 1.000 1.480 1.670
Compactin0.860 1.030 0.970 0.840 1.010 1.140 1.590
KLA/Compactin0.950 0.760 0.640 0.730 0.880 1.560 2.020
Glt8d3
KLA  Compactin  Compactin+KLA
NM_001033275 glycosyltransferase 8 domain containing 3 (Glt8d3), mRNA [NM_001033275] KLA1.030 0.790 0.720 0.790 0.910 1.380 1.600
Compactin1.000 0.980 1.070 1.040 0.960 1.040 1.340
KLA/Compactin1.000 0.810 0.770 0.900 1.010 1.510 1.740
Glt8d4
KLA  Compactin  Compactin+KLA
NM_198612 glycosyltransferase 8 domain containing 4 (Glt8d4), mRNA [NM_198612] KLA0.930 1.010 0.990 1.010 1.000 0.850 1.020
Compactin0.950 0.990 1.100 1.230 1.000 1.050 1.030
KLA/Compactin1.040 1.050 0.940 0.980 0.920 1.050 0.990
Glt8d4
KLA  Compactin  Compactin+KLA
NM_198612 glycosyltransferase 8 domain containing 4 (Glt8d4), mRNA [NM_198612] KLA1.070 1.100 1.030 1.030 1.040 0.910 1.080
Compactin1.080 1.040 1.000 0.980 0.960 1.020 0.930
KLA/Compactin1.000 1.000 0.980 1.030 0.960 1.000 0.970
Ktelc1
KLA  Compactin  Compactin+KLA
AK076379 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732474N01 product:unclassifiable, full insert sequence [AK076379] KLA1.010 1.080 0.980 1.060 1.010 0.980 1.070
Compactin1.090 1.040 1.030 1.020 1.020 0.960 1.010
KLA/Compactin0.970 1.010 0.960 0.980 1.190 1.030 0.930
Ktelc1
KLA  Compactin  Compactin+KLA
NM_172380 KTEL (Lys-Tyr-Glu-Leu) containing 1 (Ktelc1), mRNA [NM_172380] KLA1.400 1.200 1.070 1.020 1.120 1.660 1.600
Compactin1.060 1.190 1.150 1.070 1.080 0.920 1.160
KLA/Compactin1.170 1.050 1.090 1.140 1.260 1.480 1.630
Lfng
KLA  Compactin  Compactin+KLA
NM_008494 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (Lfng), mRNA [NM_008494] KLA0.980 0.960 0.890 1.010 0.950 1.030 0.920
Compactin1.070 1.010 0.950 0.980 1.050 1.100 1.080
KLA/Compactin0.950 1.020 0.930 0.910 0.960 0.920 0.950
Mfng
KLA  Compactin  Compactin+KLA
NM_008595 MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (Mfng), mRNA [NM_008595] KLA1.160 0.890 0.890 0.710 0.640 0.650 1.030
Compactin1.270 1.250 1.090 1.370 1.190 1.210 1.050
KLA/Compactin1.130 1.020 1.100 0.680 0.620 0.810 1.050
Mgat5b
KLA  Compactin  Compactin+KLA
NM_172948 mannoside acetylglucosaminyltransferase 5, isoenzyme B (Mgat5b), mRNA [NM_172948] KLA0.950 0.970 0.960 0.940 0.980 1.130 1.010
Compactin0.940 0.940 0.990 0.910 0.920 1.030 1.060
KLA/Compactin0.990 0.950 0.960 1.030 1.040 1.040 1.020
Mgat5b
KLA  Compactin  Compactin+KLA
NM_172948 mannoside acetylglucosaminyltransferase 5, isoenzyme B (Mgat5b), mRNA [NM_172948] KLA1.080 1.010 1.040 1.020 1.050 1.010 0.990
Compactin1.010 1.010 0.990 0.960 1.010 0.990 0.950
KLA/Compactin1.010 0.990 0.980 0.920 1.020 0.950 0.990
Ogt
KLA  Compactin  Compactin+KLA
BC037194 O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase), mRNA (cDNA clone IMAGE:4500866), complete cds. [BC037194] KLA1.010 1.000 0.990 0.970 1.040 1.040 1.010
Compactin0.970 1.050 0.970 1.030 1.040 1.040 1.040
KLA/Compactin1.030 1.010 0.950 0.990 0.950 0.980 0.930
Ogt
KLA  Compactin  Compactin+KLA
NM_139144 O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) (Ogt), mRNA [NM_139144] KLA0.830 0.930 0.970 0.800 0.950 0.860 0.560
Compactin0.950 0.910 1.000 1.020 1.170 0.900 0.990
KLA/Compactin0.930 0.750 0.890 0.860 1.180 0.900 0.490
Ogt
KLA  Compactin  Compactin+KLA
NM_139144 O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) (Ogt), mRNA [NM_139144] KLA0.950 1.070 1.160 1.080 1.060 1.290 1.040
Compactin0.880 0.980 0.970 0.970 1.040 1.130 1.380
KLA/Compactin0.990 1.040 1.090 1.260 1.220 1.350 0.970
Plod3
KLA  Compactin  Compactin+KLA
NM_011962 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 (Plod3), mRNA [NM_011962] KLA1.050 1.040 1.230 1.300 1.400 1.720 1.860
Compactin1.220 1.050 1.140 1.230 0.960 1.460 1.300
KLA/Compactin1.220 1.090 1.280 1.490 1.680 2.050 2.080
Plod3
KLA  Compactin  Compactin+KLA
NM_011962 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3 (Plod3), mRNA [NM_011962] KLA1.070 0.900 1.300 1.190 1.490 1.550 1.530
Compactin0.990 1.050 1.060 0.930 0.770 1.020 1.150
KLA/Compactin1.040 1.100 1.360 1.430 1.420 1.640 1.970
Pofut1
KLA  Compactin  Compactin+KLA
84794594 protein O-fucosyltransferase 1 KLA1.110 1.010 0.920 1.300 1.510 1.640 1.450
Compactin1.210 1.100 1.120 1.210 1.030 1.030 1.140
KLA/Compactin1.180 1.030 0.970 1.340 1.740 1.660 1.510
Pofut1
KLA  Compactin  Compactin+KLA
NM_001039055 protein O-fucosyltransferase 1 (Pofut1), transcript variant 2, mRNA [NM_001039055] KLA0.980 1.000 1.040 1.200 1.440 1.750 1.310
Compactin1.110 1.020 0.990 1.230 1.060 1.050 0.950
KLA/Compactin1.160 1.010 1.010 1.360 1.940 1.630 1.370
Pofut2
KLA  Compactin  Compactin+KLA
NM_030262 protein O-fucosyltransferase 2 (Pofut2), mRNA [NM_030262] KLA1.090 1.220 1.370 1.400 0.960 1.300 1.530
Compactin0.890 0.990 1.040 1.100 1.090 1.160 1.520
KLA/Compactin1.170 1.200 1.280 1.300 1.230 1.710 1.670
Pofut2
KLA  Compactin  Compactin+KLA
NM_030262 protein O-fucosyltransferase 2 (Pofut2), mRNA [NM_030262] KLA1.420 1.310 1.380 1.280 1.200 1.190 1.140
Compactin1.180 1.170 1.120 1.140 0.990 1.000 0.970
KLA/Compactin1.150 1.280 1.380 1.440 1.220 1.050 1.100
Pomgnt1
KLA  Compactin  Compactin+KLA
NM_029786 protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase (Pomgnt1), transcript variant 2, mRNA [NM_029786] KLA1.120 1.030 1.400 1.230 1.050 1.180 0.960
Compactin1.010 1.080 1.120 0.980 0.950 1.030 1.110
KLA/Compactin1.030 1.130 1.340 1.350 1.110 1.000 1.050
Pomt1
KLA  Compactin  Compactin+KLA
AK050680 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030002N23 product:protein-O-mannosyltransferase 1, full insert sequence [AK050680] KLA0.930 0.970 0.980 0.940 1.050 1.060 1.120
Compactin1.030 0.950 0.990 0.950 1.040 0.930 0.970
KLA/Compactin1.020 0.990 1.010 0.880 1.010 0.980 1.040
Pomt1
KLA  Compactin  Compactin+KLA
NM_145145 protein-O-mannosyltransferase 1 (Pomt1), mRNA [NM_145145] KLA1.160 1.010 1.020 0.800 0.650 0.760 0.850
Compactin1.100 1.070 1.120 1.110 1.060 1.000 0.940
KLA/Compactin1.100 1.030 1.040 0.810 0.680 0.780 0.790
Pomt2
KLA  Compactin  Compactin+KLA
NM_153415 protein-O-mannosyltransferase 2 (Pomt2), mRNA [NM_153415] KLA0.950 1.050 0.950 0.970 0.970 1.050 1.080
Compactin0.970 1.020 0.970 0.970 0.960 1.060 1.000
KLA/Compactin0.970 1.060 1.080 0.970 0.980 1.070 1.020
Pomt2
KLA  Compactin  Compactin+KLA
NM_153415 protein-O-mannosyltransferase 2 (Pomt2), mRNA [NM_153415] KLA0.960 1.020 0.960 0.940 0.930 0.950 0.930
Compactin1.010 0.970 1.100 1.030 0.990 0.990 0.960
KLA/Compactin1.020 1.010 1.050 0.990 0.900 0.930 0.880
Pomt2
KLA  Compactin  Compactin+KLA
NM_153415 protein-O-mannosyltransferase 2 (Pomt2), mRNA [NM_153415] KLA1.010 0.960 1.060 0.820 0.730 0.770 0.810
Compactin1.100 1.020 1.090 1.110 0.940 0.900 0.920
KLA/Compactin1.110 0.950 1.070 0.870 0.710 0.780 0.790
Rfng
KLA  Compactin  Compactin+KLA
NM_009053 RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase (Rfng), mRNA [NM_009053] KLA0.980 1.000 0.990 0.890 0.890 0.990 1.000
Compactin1.050 1.000 1.080 1.020 0.970 1.000 0.990
KLA/Compactin0.990 1.020 0.980 0.980 0.930 0.980 1.020
St3gal3
KLA  Compactin  Compactin+KLA
NM_009176 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (St3gal3), mRNA [NM_009176] KLA0.920 0.880 1.000 1.200 1.010 0.970 1.280
Compactin0.960 0.930 0.980 1.060 0.960 1.100 0.980
KLA/Compactin1.000 0.930 0.940 1.260 1.080 1.110 1.210
St3gal3
KLA  Compactin  Compactin+KLA
NM_009176 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 (St3gal3), mRNA [NM_009176] KLA1.090 1.180 1.100 1.640 0.990 0.990 1.020
Compactin1.070 1.150 1.010 1.060 1.000 0.880 0.900
KLA/Compactin1.070 1.170 1.080 1.680 1.000 0.870 1.050
St6gal1
KLA  Compactin  Compactin+KLA
NM_145933 beta galactoside alpha 2,6 sialyltransferase 1 (St6gal1), mRNA [NM_145933] KLA0.990 0.990 0.940 0.970 0.930 0.860 0.830
Compactin1.020 0.910 0.980 1.000 1.050 0.960 0.890
KLA/Compactin0.990 0.950 0.980 0.850 0.890 0.870 0.810
St6gal1
KLA  Compactin  Compactin+KLA
NM_145933 beta galactoside alpha 2,6 sialyltransferase 1 (St6gal1), mRNA [NM_145933] KLA1.010 1.030 0.810 0.350 0.290 0.280 0.310
Compactin1.070 0.910 1.050 1.090 1.290 1.050 0.650
KLA/Compactin1.020 0.900 0.820 0.380 0.310 0.280 0.320
St6gal1
KLA  Compactin  Compactin+KLA
NM_145933 beta galactoside alpha 2,6 sialyltransferase 1 (St6gal1), mRNA [NM_145933] KLA1.120 1.150 0.870 0.370 0.310 0.310 0.340
Compactin1.110 1.130 1.050 1.170 1.440 1.020 0.660
KLA/Compactin1.160 1.010 0.880 0.400 0.320 0.290 0.310
St6gal2
KLA  Compactin  Compactin+KLA
AK129462 mRNA for mKIAA1877 protein [AK129462] KLA0.980 1.060 1.000 1.020 1.040 1.010 1.020
Compactin0.960 0.990 0.980 1.090 0.990 0.980 1.020
KLA/Compactin1.000 0.960 0.960 0.970 1.000 0.970 0.980
St6gal2
KLA  Compactin  Compactin+KLA
NM_172829 beta galactoside alpha 2,6 sialyltransferase 2 (St6gal2), mRNA [NM_172829] KLA0.960 1.040 1.030 1.000 0.990 0.950 1.170
Compactin1.020 0.940 1.020 0.970 1.030 1.100 1.020
KLA/Compactin1.040 1.000 1.090 1.020 1.050 1.040 1.040