LMPD Database

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LMP006578

Record overview

LMPD IDLMP006578
Gene ID13863
SpeciesMus musculus(Mouse)
Gene Namelipocalin 5
Gene SymbolLcn5
SynonymsE-RABP; Erabp; MEP10
Chromosome2
Map Location2|2
SummaryThis gene encodes a small secreted protein that is expressed in the epididymis and binds retinoic acid. The precursor protein is processed into both a longer major form and a shorter minor form. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Jan 2013]
OrthologsView orthologs and multiple alignments for Lcn5

Proteins

epididymal-specific lipocalin-5 isoform a precursor
Refseq ID:NP_031973
Protein GI:110835737
UniProt ID:A2AJB7
mRNA ID:NM_007947
Length:192
RefSeq Status:REVIEWED
MCSVARHMESIMLFTLLGLCVGLAAGTEAAVVKDFDVNKFLGFWYEIALASKMGAYGLAHKEEKMGAMVVELKENLLALTTTYYNEGHCVLEKVAATQVD
GSAKYKVTRISGEKEVVVVATDYMTYTVIDITSLVAGAVHRAMKLYSRSLDNNGEALNNFQKIALKHGFSETDIHILKHDLTCVNALQSGQI
 
mat_peptide: 27..180
product: major form
calculated_mol_wt: 17079
peptide sequence: 
TEAAVVKDFDVNKFLGFWYEIALASKMGAYGLAHKEEKMGAMVVELKENLLALTTTYYNEGHCVLEKVAATQVDGSAKYKVTRISGEKEVVVVATDYMTY
TVIDITSLVAGAVHRAMKLYSRSLDNNGEALNNFQKIALKHGFSETDIHILKHD

mat_peptide: 30..180
product: minor form
exception: alternative processing
calculated_mol_wt: 16777
peptide sequence: 
AVVKDFDVNKFLGFWYEIALASKMGAYGLAHKEEKMGAMVVELKENLLALTTTYYNEGHCVLEKVAATQVDGSAKYKVTRISGEKEVVVVATDYMTYTVI
DITSLVAGAVHRAMKLYSRSLDNNGEALNNFQKIALKHGFSETDIHILKHD

mat_peptide: 27..192
product: major form
calculated_mol_wt: 18376
peptide sequence: 
TEAAVVKDFDVNKFLGFWYEIALASKMGAYGLAHKEEKMGAMVVELKENLLALTTTYYNEGHCVLEKVAATQVDGSAKYKVTRISGEKEVVVVATDYMTY
TVIDITSLVAGAVHRAMKLYSRSLDNNGEALNNFQKIALKHGFSETDIHILKHDYIEIKALPKPGS

mat_peptide: 30..192
product: minor form
exception: alternative processing
calculated_mol_wt: 18075
peptide sequence: 
AVVKDFDVNKFLGFWYEIALASKMGAYGLAHKEEKMGAMVVELKENLLALTTTYYNEGHCVLEKVAATQVDGSAKYKVTRISGEKEVVVVATDYMTYTVI
DITSLVAGAVHRAMKLYSRSLDNNGEALNNFQKIALKHGFSETDIHILKHDYIEIKALPKPGS

mat_peptide: 27..192
product: major form
calculated_mol_wt: 18307
peptide sequence: 
TEAAVVKDFDVNKFLGFWYEIALASKMGAYGLAHKEEKMGAMVVELKENLLALTTTYYNEGHCVLEKVAATQVDGSAKYKVTRISGEKEVVVVATDYMTY
TVIDITSLVAGAVHRAMKLYSRSLDNNGEALNNFQKIALKHGFSETDIHILKHDLTCVNALQSGQI

mat_peptide: 30..192
product: minor form
exception: alternative processing
calculated_mol_wt: 18006
peptide sequence: 
AVVKDFDVNKFLGFWYEIALASKMGAYGLAHKEEKMGAMVVELKENLLALTTTYYNEGHCVLEKVAATQVDGSAKYKVTRISGEKEVVVVATDYMTYTVI
DITSLVAGAVHRAMKLYSRSLDNNGEALNNFQKIALKHGFSETDIHILKHDLTCVNALQSGQI
 
epididymal-specific lipocalin-5 isoform b precursor
Refseq ID:NP_001036095
Protein GI:110835735
UniProt ID:A2AJB7
mRNA ID:NM_001042630
Length:180
RefSeq Status:REVIEWED
MCSVARHMESIMLFTLLGLCVGLAAGTEAAVVKDFDVNKFLGFWYEIALASKMGAYGLAHKEEKMGAMVVELKENLLALTTTYYNEGHCVLEKVAATQVD
GSAKYKVTRISGEKEVVVVATDYMTYTVIDITSLVAGAVHRAMKLYSRSLDNNGEALNNFQKIALKHGFSETDIHILKHD
 
epididymal-specific lipocalin-5 isoform c precursor
Refseq ID:NP_001263186
Protein GI:442734435
UniProt ID:A2AJB7
mRNA ID:NM_001276257
Length:192
RefSeq Status:REVIEWED
MCSVARHMESIMLFTLLGLCVGLAAGTEAAVVKDFDVNKFLGFWYEIALASKMGAYGLAHKEEKMGAMVVELKENLLALTTTYYNEGHCVLEKVAATQVD
GSAKYKVTRISGEKEVVVVATDYMTYTVIDITSLVAGAVHRAMKLYSRSLDNNGEALNNFQKIALKHGFSETDIHILKHDYIEIKALPKPGS