BioPAN: Bioinformatics Methodology For Pathway Analysis


BioPAN for Bioinformatics Methodology For Pathway Analysis is a tool that allows users to upload their own mammalian lipidomics dataset and perform a pathway analysis.
In this analysis, you can explore systematic changes in lipid pathways at different levels: lipid subclass and lipid molecular species. Those pathways will be highlighted and changes in gene activity will also be predicted.


BioPAN is fully integrated with LipidLynxX1 to allow the user to upload dataset from different naming conventions and levels.

- LipidLynxX is available on the LIPID MAPS website.


Resources

- We recommend the user to read the detailed about BioPAN before using.

- Watch our tutorial video on YouTube.









1 LipidLynxX: a data transfer hub to support integration of large scale lipidomics datasets. Zhixu Ni, Maria Fedorova.
bioRxiv, 2020.04.09.033894.


Using lipidomics analysis to determine signalling and metabolic changes in cells. An Nguyen, Simon A Rudge, Qifeng Zhang, Michael JO Wakelam.
Current Opinion in Biotechnology, Volume 43, 2017, Pages 96-103.