Tools

Online Tools

Stand-alone Tools

  • LIPID MAPS Tools Package
    Command line Perl scripts to generate SD files containing structure and ontological data for various lipid categories. The current version supports structure generation for Fatty acyls (FA), Glycerolipids (GL), Glycerophospholipids (GP), Cardiolipins (CL), Sphingolipids (SP) and Sterols (ST). Please see our documentation for specific main and subclasses. FAStrGen.pl | GLStrGen.pl | GPStrGen.pl | CLStrGen.pl | SPStrGen.pl | STStrGen.pl
  • LIPID MAPS MS Prediction Tool
    A standalone Windows application for predicting possible molecular species for a given MS ion. This application enables a user to enter the m/z value of an unknown lipid ion and predict the most likely molecular species, based on internally generated lists of side-chains and headgroups typically found in mammalian versions of glycerolipids, glycerophospholipids (including cardiolipins) and sphingolipids. There are separate user intefaces for:glycerolipids, glycerophospholipids, cardiolipins, sphingolipids, fatty acids and cholesteryl esters. There is also a user interface to calculate the exact mass of glycerophospholipid and glycerolipid ions with defined side-chains and headgroups, along with a display of the isotopic distribution profile.