<?xml version="1.0" encoding="ISO-8859-1" standalone="yes"?>
<!DOCTYPE pathwaydocument [
  <!ELEMENT pathwaydocument              (pathway,presentationlist?,experimentlist?)>
  <!ELEMENT synonymlist                  (synonym)*>
  <!ELEMENT synonym                      EMPTY>
  <!ATTLIST synonym name                 CDATA #REQUIRED>
  <!ELEMENT databaselist                 (database)*>
  <!ELEMENT database                     EMPTY>
  <!ATTLIST database name                CDATA #REQUIRED>
  <!ATTLIST database description         CDATA "">
  <!ATTLIST database host                CDATA "">
  <!ATTLIST database user                CDATA "">
  <!ATTLIST database port                CDATA "">
  <!ATTLIST database table               CDATA "">
  <!ATTLIST database record              CDATA "">
  <!ELEMENT datasource                   (file|database)?>
  <!ELEMENT file                         EMPTY>
  <!ATTLIST file path                    CDATA #REQUIRED>
  <!ATTLIST file name                    CDATA "">
  <!ELEMENT pathwaylist                  (pathway*)>
  <!ELEMENT pathway                      (synonymlist?,databaselist?,participantlist?,interactionlist?,pathwaylist?)>
  <!ATTLIST pathway name                 CDATA #REQUIRED>
  <!ATTLIST pathway description          CDATA "">
  <!ATTLIST pathway pathwaytype          CDATA "">
  <!ATTLIST pathway authors              CDATA "">
  <!ATTLIST pathway history              CDATA "">
  <!ELEMENT participantlist              (participant*)>
  <!ELEMENT participant                  (synonymlist?,databaselist?,(compound|smallmolecule|nucleicacid|protein))>
  <!ATTLIST participant index            CDATA #REQUIRED>
  <!ATTLIST participant name             CDATA #REQUIRED>
  <!ATTLIST participant breaks           CDATA #REQUIRED>
  <!ATTLIST participant description      CDATA "">
  <!ELEMENT compound                     EMPTY>
  <!ATTLIST compound name                CDATA #REQUIRED>
  <!ATTLIST compound compoundtype        CDATA "">
  <!ELEMENT nucleicacid                  (synonymlist?,datasource?,databaselist?)>
  <!ATTLIST nucleicacid name             CDATA #REQUIRED>
  <!ATTLIST nucleicacid description      CDATA "">
  <!ATTLIST nucleicacid recordid         CDATA "">
  <!ATTLIST nucleicacid compoundtype     CDATA "">
  <!ATTLIST nucleicacid nucleicacidtype  CDATA "">
  <!ATTLIST nucleicacid sequence         CDATA "">
  <!ATTLIST nucleicacid ensembleid       CDATA "">
  <!ATTLIST nucleicacid genbankid        CDATA "">
  <!ATTLIST nucleicacid enotrezgeneid    CDATA "">
  <!ELEMENT protein                      (synonymlist?,datasource?,databaselist?)>
  <!ATTLIST protein name                 CDATA #REQUIRED>
  <!ATTLIST protein description          CDATA "">
  <!ATTLIST protein recordid             CDATA "">
  <!ATTLIST protein compoundtype         CDATA "">
  <!ATTLIST protein proteintype          CDATA "">
  <!ATTLIST protein sequence             CDATA "">
  <!ATTLIST protein genesymbol           CDATA "">
  <!ELEMENT smallmolecule                (synonymlist?,datasource?,databaselist?)>
  <!ATTLIST smallmolecule name           CDATA #REQUIRED>
  <!ATTLIST smallmolecule description    CDATA "">
  <!ATTLIST smallmolecule recordid       CDATA "">
  <!ATTLIST smallmolecule compoundtype   CDATA "">
  <!ATTLIST smallmolecule smallmoleculetype CDATA "">
  <!ATTLIST smallmolecule smallmoleculetypeid CDATA "">
  <!ATTLIST smallmolecule abbreviation   CDATA "">
  <!ATTLIST smallmolecule chemicalformula CDATA "">
  <!ATTLIST smallmolecule chemicalstring CDATA "">
  <!ATTLIST smallmolecule charge         CDATA "">
  <!ATTLIST smallmolecule molecularweight CDATA "">
  <!ELEMENT interactionlist              (interaction*)>
  <!ELEMENT interaction                  (synonymlist?,databaselist?,participantuselist?)>
  <!ATTLIST interaction index            CDATA #REQUIRED>
  <!ATTLIST interaction name             CDATA #REQUIRED>
  <!ATTLIST interaction description      CDATA "">
  <!ATTLIST interaction interactiontype  CDATA "">
  <!ATTLIST interaction reversible       CDATA "false">
  <!ELEMENT participantuselist           (participantuse*)>
  <!ELEMENT participantuse               EMPTY>
  <!ATTLIST participantuse index         CDATA #REQUIRED>
  <!ATTLIST participantuse participantusetype CDATA "">
  <!ATTLIST participantuse stoichiometry CDATA "">
  <!ELEMENT presentationlist             (presentation*)>
  <!ELEMENT presentation                 (synonymlist?,participantstatelist?,interactionstatelist?,pathwaystatelist?)>
  <!ATTLIST presentation name            CDATA #REQUIRED>
  <!ATTLIST presentation description     CDATA "">
  <!ATTLIST presentation zoom            CDATA #REQUIRED>
  <!ELEMENT participantstatelist         (participantstate*)>
  <!ELEMENT participantstate             EMPTY>
  <!ATTLIST participantstate index       CDATA #REQUIRED>
  <!ATTLIST participantstate visible     CDATA "true">
  <!ATTLIST participantstate x           CDATA #REQUIRED>
  <!ATTLIST participantstate y           CDATA #REQUIRED>
  <!ATTLIST participantstate z           CDATA #REQUIRED>
  <!ATTLIST participantstate shape       CDATA #IMPLIED>
  <!ATTLIST participantstate resize      CDATA #IMPLIED>
  <!ATTLIST participantstate width       CDATA #IMPLIED>
  <!ATTLIST participantstate height      CDATA #IMPLIED>
  <!ATTLIST participantstate depth       CDATA #IMPLIED>
  <!ATTLIST participantstate bodycolor   CDATA #IMPLIED>
  <!ATTLIST participantstate labelcolor  CDATA #IMPLIED>
  <!ATTLIST participantstate shadowcolor CDATA #IMPLIED>
  <!ATTLIST participantstate fontname    CDATA #IMPLIED>
  <!ATTLIST participantstate fontsize    CDATA #IMPLIED>
  <!ATTLIST participantstate gapsizechange CDATA #IMPLIED>
  <!ATTLIST participantstate indent1     CDATA #IMPLIED>
  <!ATTLIST participantstate indent2     CDATA #IMPLIED>
  <!ATTLIST participantstate indent3     CDATA #IMPLIED>
  <!ELEMENT pathwaystatelist             (pathwaystate*)>
  <!ELEMENT pathwaystate                 EMPTY>
  <!ATTLIST pathwaystate index           CDATA #REQUIRED>
  <!ATTLIST pathwaystate visible         CDATA "true">
  <!ATTLIST pathwaystate x               CDATA #REQUIRED>
  <!ATTLIST pathwaystate y               CDATA #REQUIRED>
  <!ATTLIST pathwaystate z               CDATA #REQUIRED>
  <!ELEMENT interactionstatelist         (interactionstate*)>
  <!ELEMENT interactionstate             EMPTY>
  <!ATTLIST interactionstate index       CDATA #REQUIRED>
  <!ATTLIST interactionstate visible     CDATA "true">
  <!ATTLIST interactionstate x           CDATA #REQUIRED>
  <!ATTLIST interactionstate y           CDATA #REQUIRED>
  <!ATTLIST interactionstate z           CDATA #REQUIRED>
  <!ATTLIST interactionstate linewidth   CDATA #REQUIRED>
  <!ATTLIST interactionstate glyphsize   CDATA #REQUIRED>
  <!ATTLIST interactionstate bodycolor   CDATA #REQUIRED>
  <!ELEMENT experimentlist               (experiment*)>
  <!ELEMENT experiment                   (type,id,date,limsid,description,visible,labname)*>
  <!ATTLIST experiment type              CDATA #REQUIRED>
  <!ATTLIST experiment id                CDATA #REQUIRED>
  <!ATTLIST experiment date              CDATA #REQUIRED>
  <!ATTLIST experiment limsid            CDATA #REQUIRED>
  <!ATTLIST experiment description       CDATA #REQUIRED>
  <!ATTLIST experiment visible           CDATA #REQUIRED>
  <!ATTLIST experiment labname           CDATA #REQUIRED>
]>
<pathwaydocument >
    <pathway name="Unnamed pathway" pathwaytype="Metabolic" authors="" history="" >
        <participantlist >
            <participant index="0" name="Protein node" breaks="0" >
                <compound name="Protein node" compoundtype="Protein" />
            </participant>
            <participant index="1" name="Protein node 2" breaks="0" >
                <compound name="Protein node 2" compoundtype="Protein" />
            </participant>
            <participant index="2" name="AA" breaks="0" >
                <compound name="AA" compoundtype="Small molecule" />
            </participant>
        </participantlist>
    </pathway>
    <presentationlist >
        <presentation name="Unnamed pathway" zoom="40.0" >
            <participantstatelist >
                <participantstate index="0" visible="true" x="-14.213523054041904" y="10.453331458330293" z="0.0" shape="1" resize="false" width="6.424" height="1.4" depth="0.0" bodycolor="a0e5c9ff" labelcolor="000000ff" shadowcolor="7f7f7fff" fontname="Helvetica-Bold" fontsize="1.0" gapsizechange="0.0" indent1="0" indent2="0" indent3="0" />
                <participantstate index="1" visible="true" x="-1.3286009203954505" y="10.503467340624443" z="0.0" shape="1" resize="false" width="7.096" height="1.4" depth="0.0" bodycolor="a0e5c9ff" labelcolor="000000ff" shadowcolor="7f7f7fff" fontname="Helvetica-Bold" fontsize="1.0" gapsizechange="0.0" indent1="0" indent2="0" indent3="0" />
                <participantstate index="2" visible="true" x="12.308359470078614" y="10.403195576036142" z="0.0" shape="0" resize="false" width="5.599999904632568" height="1.4" depth="0.0" bodycolor="a0bce5ff" labelcolor="000000ff" shadowcolor="7f7f7fff" fontname="Helvetica-Bold" fontsize="1.0" gapsizechange="0.0" indent1="0" indent2="0" indent3="0" />
            </participantstatelist>
        </presentation>
    </presentationlist>
    <experimentlist >
    </experimentlist>
</pathwaydocument>
